RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CTBP1Q13363 440 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 RBBP5Q15291 538 aaKnown RBP13.81□□□□□ -0.2
BRCA1-209ENST00000470026 BRMS1LQ5PSV4 323 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 PRAMEF19Q5SWL8 479 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 RARS2Q5T160 578 aaKnown RBP13.81□□□□□ -0.2
BRCA1-209ENST00000470026 RASIP1Q5U651 963 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 RANBP10Q6VN20 620 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 ARPINQ7Z6K5 226 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 LILRA2Q8N149 483 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 TXNDC5Q8NBS9 432 aaKnown RBP13.81□□□□□ -0.2
BRCA1-209ENST00000470026 PPHLN1Q8NEY8 458 aaKnown RBP13.81□□□□□ -0.2
BRCA1-209ENST00000470026 USP33Q8TEY7 942 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 MYLPFQ96A32 169 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 GCNAQ96QF7 691 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 PKMYT1Q99640 499 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 ENTPD7Q9NQZ7 604 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 MRGBPQ9NV56 204 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 MIOSQ9NXC5 875 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 CLIC5Q9NZA1 410 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 SARDHQ9UL12 918 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 TIMM13Q9Y5L4 95 aaPredicted RBP13.81□□□□□ -0.2
BRCA1-209ENST00000470026 C17orf102A2RUQ5 167 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 FGF10O15520 208 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-209ENST00000470026 IRAK2O43187 625 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 THP07101 528 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 SAT1P21673 171 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 ATP5F1P24539 256 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-209ENST00000470026 INHBEP58166 350 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 ZNF460Q14592 562 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 POU6F1Q14863 301 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 SLC14A2Q15849 920 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 USP41Q3LFD5 358 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 KIAA0408Q6ZU52 694 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 ATPAF2Q8N5M1 289 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 CEP70Q8NHQ1 597 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 PPP1R36Q96LQ0 422 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 FICDQ9BVA6 458 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 TRIM62Q9BVG3 475 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 IGSF5Q9NSI5 407 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 FAM105AQ9NUU6 356 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 NCKIPSDQ9NZQ3 722 aa13.8□□□□□ -0.2
BRCA1-209ENST00000470026 CCDC78A2IDD5 438 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 YY1P25490 414 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 RPL9P32969 192 aaKnown RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 CD151P48509 253 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 AFF1P51825 1210 aaKnown RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 KPNA2P52292 529 aaKnown RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 MRPS22P82650 360 aaKnown RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 TECRLQ5HYJ1 363 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 TMEM102Q8N9M5 508 aaPredicted RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 IPMKQ8NFU5 416 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 NAT14Q8WUY8 206 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 GAD1Q99259 594 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 ACBD6Q9BR61 282 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 RHOBTB2Q9BYZ6 727 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 PRKD2Q9BZL6 878 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 SLC39A8Q9C0K1 460 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 Q9H521 79 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 PLK2Q9NYY3 685 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 UBAP1Q9NZ09 502 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 SLC2A6Q9UGQ3 507 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 FBXO5Q9UKT4 447 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 CNOT11Q9UKZ1 510 aaKnown RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 NYNRINQ9P2P1 1898 aaKnown RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 PTPRDP23468 1912 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 ANKRD33BA6NCL7 494 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 DFFAO00273 331 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 CRTAMO95727 393 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 CYP11A1P05108 521 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 CPT1AP50416 773 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 PKNOX1P55347 436 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 PFKPQ01813 784 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 SULT2A1Q06520 285 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 GALNT1Q10472 559 aaPredicted RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 DYNC1I2Q13409 638 aaKnown RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 LSAMPQ13449 338 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 ART3Q13508 389 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 CNGA3Q16281 694 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 PDCD2Q16342 344 aaPredicted RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 PSMD5Q16401 504 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 UPP1Q16831 310 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 TIGD5Q53EQ6 642 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 MORN1Q5T089 497 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 CNSTQ6PJW8 725 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 TRIM67Q6ZTA4 783 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 AHI1Q8N157 1196 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 BHLHE22Q8NFJ8 381 aaPredicted RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 HMGCLL1Q8TB92 370 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 HEXDCQ8WVB3 486 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 LENG1Q96BZ8 264 aaPredicted RBP13.79□□□□□ -0.2
BRCA1-209ENST00000470026 FAR2Q96K12 515 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 MRGPRX2Q96LB1 330 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 LRGUKQ96M69 825 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 KLHL32Q96NJ5 620 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 OMDQ99983 421 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 KATNAL1Q9BW62 490 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 ZNF696Q9H7X3 374 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 ARNT2Q9HBZ2 717 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 OSER1Q9NX31 292 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 G3BP2Q9UN86 482 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms