RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 MYLK3Q32MK0 819 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 ACCSLQ4AC99 568 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 FAXCQ5TGI0 409 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 DUPD1Q68J44 220 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 KCTD11Q693B1 232 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 KIAA1211LQ6NV74 962 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 C8orf74Q6P047 294 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 C4orf22Q6V702 233 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 MAATS1Q7Z4T9 603 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 STK40Q8N2I9 435 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 OR6K2Q8NGY2 324 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 SPATA22Q8NHS9 363 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 SEC14L1Q92503 715 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 FAM129BQ96TA1 746 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 CPEB1Q9BZB8 566 aaKnown RBP11.28□□□□□ -0.6
VCP-204ENST00000466100 CHRDQ9H2X0 955 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 ETNK1Q9HBU6 452 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 HAUS2Q9NVX0 235 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 POLR3BQ9NW08 1133 aaPredicted RBP11.28□□□□□ -0.6
VCP-204ENST00000466100 C2orf42Q9NWW7 574 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 DLGAP2Q9P1A6 1054 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 HECAQ9UBI9 543 aaPredicted RBP11.28□□□□□ -0.6
VCP-204ENST00000466100 SUN2Q9UH99 717 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 EVLQ9UI08 416 aaPredicted RBP11.28□□□□□ -0.6
VCP-204ENST00000466100 FRYLO94915 3013 aa11.27□□□□□ -0.6
VCP-204ENST00000466100 ZNF318Q5VUA4 2279 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 TRAFD1O14545 582 aaPredicted RBP11.27□□□□□ -0.61
VCP-204ENST00000466100 HTRA2O43464 458 aaPredicted RBP11.27□□□□□ -0.61
VCP-204ENST00000466100 NEBLO76041 1014 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 POP4O95707 220 aaKnown RBP11.27□□□□□ -0.61
VCP-204ENST00000466100 MT-CYBP00156 380 aaPredicted RBP11.27□□□□□ -0.61
VCP-204ENST00000466100 HOXB2P14652 356 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 FDFT1P37268 417 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 CD86P42081 329 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 MAPK8P45983 427 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 VPS41P49754 854 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 COPAP53621 1224 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 TRAF2Q12933 501 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 GPS1Q13098 491 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 KCNJ11Q14654 390 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 GLE1Q53GS7 698 aaKnown RBP11.27□□□□□ -0.61
VCP-204ENST00000466100 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 CCHCR1Q8TD31 782 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 CPT1BQ92523 772 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 SPOCK2Q92563 424 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 MRGPRX2Q96LB1 330 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 TUBGCP5Q96RT8 1024 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 TRIB3Q96RU7 358 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 RBM15Q96T37 977 aaKnown RBP eCLIP11.27□□□□□ -0.61
VCP-204ENST00000466100 HEPHQ9BQS7 1158 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 ERP44Q9BS26 406 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 TDRD1Q9BXT4 1180 aaKnown RBP11.27□□□□□ -0.61
VCP-204ENST00000466100 RSPH9Q9H1X1 276 aaPredicted RBP11.27□□□□□ -0.61
VCP-204ENST00000466100 SCUBE2Q9NQ36 999 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 RAB6BQ9NRW1 208 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 VPS45Q9NRW7 570 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 DMGDHQ9UI17 866 aaKnown RBP11.27□□□□□ -0.61
VCP-204ENST00000466100 SARDHQ9UL12 918 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 SLC8A2Q9UPR5 921 aa11.27□□□□□ -0.61
VCP-204ENST00000466100 FARP1Q9Y4F1 1045 aaPredicted RBP11.27□□□□□ -0.61
VCP-204ENST00000466100 ZNF106Q9H2Y7 1883 aaKnown RBP11.27□□□□□ -0.61
VCP-204ENST00000466100 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.26□□□□□ -0.61
VCP-204ENST00000466100 TSPAN11A1L157 253 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 TMEM221A6NGB7 291 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 EFCAB8A8MWE9 144 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 M0R296 226 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 DNALI1O14645 258 aaPredicted RBP11.26□□□□□ -0.61
VCP-204ENST00000466100 FZD6O60353 706 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 SOCS5O75159 536 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 ANXA9O76027 345 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 TMEM63AO94886 807 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 SUN1O94901 812 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 SEC31AO94979 1220 aaKnown RBP11.26□□□□□ -0.61
VCP-204ENST00000466100 PIGNO95427 931 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 AP2A1O95782 977 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 SERPINF2P08697 491 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 ALADP13716 330 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 TPSB2P20231 275 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 ADRA1AP35348 466 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 ACTN2P35609 894 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 RECQLP46063 649 aaPredicted RBP11.26□□□□□ -0.61
VCP-204ENST00000466100 RPL21P46778 160 aaKnown RBP11.26□□□□□ -0.61
VCP-204ENST00000466100 SLC7A5Q01650 507 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 ITKQ08881 620 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 MPP3Q13368 585 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 TPSAB1Q15661 275 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 CRY1Q16526 586 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 EOGTQ5NDL2 527 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 RNASEH2BQ5TBB1 312 aaKnown RBP11.26□□□□□ -0.61
VCP-204ENST00000466100 ANKRD22Q5VYY1 191 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 SYT13Q7L8C5 426 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 ZSWIM9Q86XI8 627 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 CAMK1DQ8IU85 385 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 TAB3Q8N5C8 712 aaPredicted RBP11.26□□□□□ -0.61
VCP-204ENST00000466100 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.26□□□□□ -0.61
VCP-204ENST00000466100 NAT8LQ8N9F0 302 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 TMIEQ8NEW7 156 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 OR2T3Q8NH03 318 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 OR8D1Q8WZ84 308 aa11.26□□□□□ -0.61
VCP-204ENST00000466100 ECHDC3Q96DC8 303 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms