RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 A0A1W2PPC1 479 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 TNPO2O14787 897 aaKnown RBP4.54□□□□□ -1.68
LRCH3-211ENST00000466054 EPB41L2O43491 1005 aaKnown RBP4.54□□□□□ -1.68
LRCH3-211ENST00000466054 NDUFB8O95169 186 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 F9P00740 461 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 IGKV3-20P01619 116 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 CD53P19397 219 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 KRT9P35527 623 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 CENPAP49450 140 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 ARSFP54793 590 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 YWHAZP63104 245 aaKnown RBP4.54□□□□□ -1.68
LRCH3-211ENST00000466054 ZXDBP98169 803 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 EFNB1P98172 346 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 ME3Q16798 604 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 EDRF1Q3B7T1 1238 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 Q5PR19 223 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 C9orf50Q5SZB4 431 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 ACAD10Q6JQN1 1059 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 TRIM74Q86UV6 250 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 TRIM73Q86UV7 250 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 LRRC57Q8N9N7 239 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 C11orf65Q8NCR3 313 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 NFKBIDQ8NI38 313 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 RFFLQ8WZ73 363 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 RRP36Q96EU6 259 aaKnown RBP4.54□□□□□ -1.68
LRCH3-211ENST00000466054 VEZTQ9HBM0 779 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 IL1RAPL1Q9NZN1 696 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 TBC1D14Q9P2M4 693 aa4.54□□□□□ -1.68
LRCH3-211ENST00000466054 NOTCH4Q99466 2003 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 IGLV5-39A0A0G2JS06 123 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 URODP06132 367 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 ENO3P13929 434 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-211ENST00000466054 COX7A2P14406 83 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 CD72P21854 359 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 ABCD3P28288 659 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 MPP1Q00013 466 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 PTP4A2Q12974 167 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 DDX10Q13206 875 aaKnown RBP4.53□□□□□ -1.68
LRCH3-211ENST00000466054 INO80CQ6PI98 192 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-211ENST00000466054 PARM1Q6UWI2 310 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 RRM2BQ7LG56 351 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 GPSM1Q86YR5 675 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 TMEM163Q8TC26 289 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 LPAR1Q92633 364 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 ZUFSPQ96AP4 578 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 LMLNQ96KR4 655 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 NLRP4Q96MN2 994 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 KLHL31Q9H511 634 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 SLC32A1Q9H598 525 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 KCND2Q9NZV8 630 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 MPP6Q9NZW5 540 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 PEMTQ9UBM1 199 aa4.53□□□□□ -1.68
LRCH3-211ENST00000466054 TMEM272A0A1B0GTI8 110 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 PABPN1LA6NDY0 278 aaKnown RBP4.52□□□□□ -1.69
LRCH3-211ENST00000466054 DDTLA6NHG4 134 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-211ENST00000466054 EBAG9O00559 213 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 HSPB6O14558 160 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 SLC28A2O43868 658 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 SH3BP5O60239 455 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 SYF2O95926 243 aaKnown RBP4.52□□□□□ -1.69
LRCH3-211ENST00000466054 FGF2P09038 288 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 PTPN2P17706 415 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 RFC1P35251 1148 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-211ENST00000466054 GGT5P36269 586 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 UFM1P61960 85 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 CYP4A11Q02928 519 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 SLC18A2Q05940 514 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 TDGQ13569 410 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 FAM69AQ5T7M9 428 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 HEPHL1Q6MZM0 1159 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 TMEM81Q6P7N7 255 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 FAM83HQ6ZRV2 1179 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-211ENST00000466054 CHD1LQ86WJ1 897 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 NR2C2APQ86WQ0 139 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 HORMAD2Q8N7B1 307 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 GDPD5Q8WTR4 605 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 DNASE2BQ8WZ79 361 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 WDR77Q9BQA1 342 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-211ENST00000466054 UBA5Q9GZZ9 404 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 MRPL44Q9H9J2 332 aaKnown RBP4.52□□□□□ -1.69
LRCH3-211ENST00000466054 ZBTB40Q9NUA8 1239 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 KIAA1456Q9P272 454 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 PLEKHB1Q9UF11 243 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-211ENST00000466054 ERRFI1Q9UJM3 462 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-211ENST00000466054 PCDHGB5Q9Y5G0 923 aa4.52□□□□□ -1.69
LRCH3-211ENST00000466054 CBY3A6NI87 242 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 IFITM10A6NMD0 228 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 B4E171 279 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 STMND1H3BQB6 276 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 WDHD1O75717 1129 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-211ENST00000466054 TMEM63AO94886 807 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 ATP1A3P13637 1013 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 ZNF8P17098 575 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-211ENST00000466054 CHRNB2P17787 502 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 CTPS1P17812 591 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 TNFRSF1BP20333 461 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 AVPR1AP37288 418 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 TSPAN7P41732 249 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 POLD2P49005 469 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 CASP6P55212 293 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms