RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TMEM150AQ86TG1 271 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 FAM131BQ86XD5 332 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 TMC8Q8IU68 726 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 SPPL2CQ8IUH8 684 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 LILRA2Q8N149 483 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 ELMOD1Q8N336 334 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 PLD5Q8N7P1 536 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 PCDH19Q8TAB3 1148 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 CCHCR1Q8TD31 782 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 GRK7Q8WTQ7 553 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 AUTS2Q8WXX7 1259 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 SEC14L1Q92503 715 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 MRPS31Q92665 395 aaKnown RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 FATE1Q969F0 183 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 MAGOHBQ96A72 148 aaKnown RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 MRPL38Q96DV4 380 aaKnown RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 BTN2A3PQ96KV6 586 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 CAPZA3Q96KX2 299 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 PSMB7Q99436 277 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 DDX50Q9BQ39 737 aaKnown RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 DCLK3Q9C098 648 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 TKTL2Q9H0I9 626 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 NKX2-4Q9H2Z4 354 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 DHX35Q9H5Z1 703 aaKnown RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 ZWILCHQ9H900 591 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 SLC28A3Q9HAS3 691 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 GCM1Q9NP62 436 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 FAM53CQ9NYF3 392 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 CWC15Q9P013 229 aaKnown RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 MARCH2Q9P0N8 246 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 SFMBT1Q9UHJ3 866 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 ZNF510Q9Y2H8 683 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 NR2E1Q9Y466 385 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 CXorf51AA0A1B0GTR3 108 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 BCLAF3A2AJT9 711 aaKnown RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 CFAP69A5D8W1 941 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 I6L893 689 aaPredicted RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 NDC80O14777 642 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 APOL1O14791 398 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 DCLK1O15075 740 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 FGF10O15520 208 aaPredicted RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 LIASO43766 372 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 ACSL4O60488 711 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 CST8O60676 142 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 MOSPD3O75425 235 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 SOAT2O75908 522 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 APOEP02649 317 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 CD48P09326 243 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 KRT10P13645 584 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 HOXB8P17481 243 aaPredicted RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 TNFRSF8P28908 595 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 KIR2DL1P43626 348 aaPredicted RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 KIR2DL2P43627 348 aaPredicted RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 NME3Q13232 169 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 DPYSQ14117 519 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 KRT81Q14533 505 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 NOMO1Q15155 1222 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 OASLQ15646 514 aaKnown RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 CA9Q16790 459 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 RAB6CQ53S08 254 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 DAB2IPQ5VWQ8 1189 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 PLPP4Q5VZY2 271 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 HEATR6Q6AI08 1181 aaKnown RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 CCDC137Q6PK04 289 aaKnown RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 C6orf15Q6UXA7 325 aaPredicted RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 HTR3DQ70Z44 454 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 GAREM2Q75VX8 874 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 ADAT2Q7Z6V5 191 aaKnown RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 C1QL4Q86Z23 238 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 CCDC50Q8IVM0 306 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 FAM217AQ8IXS0 508 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 ZNF683Q8IZ20 524 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 ARHGEF39Q8N4T4 335 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 CCDC185Q8N715 623 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 PQLC3Q8N755 202 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 HNRNPLLQ8WVV9 542 aaKnown RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 TIFAQ96CG3 184 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 RTP4Q96DX8 246 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 TSGA13Q96PP4 275 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 CSPG4P5Q96PW8 444 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 PRMT1Q99873 361 aaKnown RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 HERPUD2Q9BSE4 406 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 LRRC1Q9BTT6 524 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 RNF38Q9H0F5 515 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 RAB6CQ9H0N0 254 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 TASP1Q9H6P5 420 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 ZNF552Q9H707 407 aaPredicted RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 CATSPERBQ9H7T0 1116 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 TLE6Q9H808 572 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 FAM204AQ9H8W3 233 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 ZNF334Q9HCZ1 680 aaPredicted RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 ANLNQ9NQW6 1124 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 GDF3Q9NR23 364 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 RBM12Q9NTZ6 932 aaKnown RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS41-211ENST00000466017 PRR13Q9NZ81 148 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 CGGBP1Q9UFW8 167 aaPredicted RBP5.63□□□□□ -1.51
VPS41-211ENST00000466017 OR12D3Q9UGF7 316 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 RASAL2Q9UJF2 1139 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 MAGED2Q9UNF1 606 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms