RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 AIF1P55008 147 aa18.14■□□□□ 0.49
SSB-206ENST00000461708 YBEYP58557 167 aaPredicted RBP18.14■□□□□ 0.49
SSB-206ENST00000461708 PFN3P60673 137 aa18.14■□□□□ 0.49
SSB-206ENST00000461708 C1QBPQ07021 282 aaKnown RBP18.14■□□□□ 0.49
SSB-206ENST00000461708 LRRC69Q6ZNQ3 347 aa18.14■□□□□ 0.49
SSB-206ENST00000461708 SLFN11Q7Z7L1 901 aa18.14■□□□□ 0.49
SSB-206ENST00000461708 RYBPQ8N488 228 aaPredicted RBP18.14■□□□□ 0.49
SSB-206ENST00000461708 CCDC185Q8N715 623 aa18.14■□□□□ 0.49
SSB-206ENST00000461708 RTL3Q8N8U3 475 aaKnown RBP18.14■□□□□ 0.49
SSB-206ENST00000461708 ZNF548Q8NEK5 533 aaPredicted RBP18.14■□□□□ 0.49
SSB-206ENST00000461708 ANKRD20A12PQ8NF67 263 aa18.14■□□□□ 0.49
SSB-206ENST00000461708 FGF11Q92914 225 aa18.14■□□□□ 0.49
SSB-206ENST00000461708 DCBLD2Q96PD2 775 aa18.14■□□□□ 0.49
SSB-206ENST00000461708 SELENOOQ9BVL4 669 aa18.14■□□□□ 0.49
SSB-206ENST00000461708 LIMA1Q9UHB6 759 aaKnown RBP18.14■□□□□ 0.49
SSB-206ENST00000461708 ACTL7AQ9Y615 435 aa18.14■□□□□ 0.49
SSB-206ENST00000461708 LY6G6EA0A0G2JKS1 128 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 LGALS16A8MUM7 142 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 K7ESM1 405 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 KRIT1O00522 736 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 NEMP1O14524 444 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 TOR1BO14657 336 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 TPP1O14773 563 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 ABL2P42684 1182 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 SUOXP51687 545 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 COPB1P53618 953 aaKnown RBP18.13■□□□□ 0.49
SSB-206ENST00000461708 SYCP1Q15431 976 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 ZCCHC8Q6NZY4 707 aaKnown RBP18.13■□□□□ 0.49
SSB-206ENST00000461708 WDR59Q6PJI9 974 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 PHLDB2Q86SQ0 1253 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 NEK11Q8NG66 645 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 CENPTQ96BT3 561 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 TBATAQ96M53 351 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 GDAP1L1Q96MZ0 367 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 TTYH3Q9C0H2 523 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 NOL6Q9H6R4 1146 aaKnown RBP18.13■□□□□ 0.49
SSB-206ENST00000461708 DKK3Q9UBP4 350 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 U3KQA8 63 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 MGAQ8IWI9 3026 aa18.13■□□□□ 0.49
SSB-206ENST00000461708 TCRBV5S1A1TA0A578 114 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 ANKRD62A6NC57 917 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 WASH4PA8MWX3 477 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 SPINT1O43278 529 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 BRINP1O60477 761 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 GJB6O95452 261 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 UGT2B4P06133 528 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 ZNF143P52747 638 aaPredicted RBP18.12■□□□□ 0.49
SSB-206ENST00000461708 RAD51Q06609 339 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 TBC1D25Q3MII6 688 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 PARP15Q460N3 678 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 EFHC2Q5JST6 749 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 GDPD4Q6W3E5 623 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 MON1BQ7L1V2 547 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 TMC6Q7Z403 805 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 OR6K2Q8NGY2 324 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 HCAR2Q8TDS4 363 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 BTN2A2Q8WVV5 523 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 GRAMD1AQ96CP6 724 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 DEPDC7Q96QD5 511 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 ERGIC2Q96RQ1 377 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 CNPY3Q9BT09 278 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 MAGEB5Q9BZ81 275 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 DONSONQ9NYP3 566 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 IPO11Q9UI26 975 aaKnown RBP18.12■□□□□ 0.49
SSB-206ENST00000461708 SALL4Q9UJQ4 1053 aa18.12■□□□□ 0.49
SSB-206ENST00000461708 BUB1O43683 1085 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 DXOO77932 396 aaKnown RBP18.11■□□□□ 0.49
SSB-206ENST00000461708 TMCC1O94876 653 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 EPHB2P29323 1055 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 GKP32189 559 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 HTR7P34969 479 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 YPEL5P62699 121 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 MYL5Q02045 173 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 PDE1CQ14123 709 aaPredicted RBP18.11■□□□□ 0.49
SSB-206ENST00000461708 PTK2BQ14289 1009 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 ZNF542PQ5EBM4 170 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 LSMEM2Q8N112 164 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 UMODL1-AS1Q8N2C9 162 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 KLHL32Q96NJ5 620 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 BBC3Q96PG8 261 aaPredicted RBP18.11■□□□□ 0.49
SSB-206ENST00000461708 UBL7Q96S82 380 aaPredicted RBP18.11■□□□□ 0.49
SSB-206ENST00000461708 EPAS1Q99814 870 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 C1QTNF7Q9BXJ2 289 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 CPEB1Q9BZB8 566 aaKnown RBP18.11■□□□□ 0.49
SSB-206ENST00000461708 PRORYQ9H606 182 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 CATSPERBQ9H7T0 1116 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 ANO10Q9NW15 660 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 SHROOM3Q8TF72 1996 aa18.11■□□□□ 0.49
SSB-206ENST00000461708 RP1P56715 2156 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 FGF10O15520 208 aaPredicted RBP18.1■□□□□ 0.49
SSB-206ENST00000461708 AQP9O43315 295 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 IGSF6O95976 241 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 CCDC172P0C7W6 258 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 JUNDP17535 347 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 ITPKBP27987 946 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 SERINC3Q13530 473 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 PPP1R15BQ5SWA1 713 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 ATXN7L2Q5T6C5 722 aaPredicted RBP18.1■□□□□ 0.49
SSB-206ENST00000461708 PPP1R2P3Q6NXS1 205 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 DNAJC24Q6P3W2 148 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms