RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 ECT2LQ008S8 904 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 ARL13BQ3SXY8 428 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 ARHGAP40Q5TG30 622 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 INO80CQ6PI98 192 aaPredicted RBP13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 KDM7AQ6ZMT4 941 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 SLFN11Q7Z7L1 901 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 PSTKQ8IV42 348 aaKnown RBP13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 CNGA4Q8IV77 575 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 VOPP1Q96AW1 172 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 GRAMD1AQ96CP6 724 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 TRIM5Q9C035 493 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 NOL6Q9H6R4 1146 aaKnown RBP13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 POLR1BQ9H9Y6 1135 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 MRPL47Q9HD33 250 aaKnown RBP13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 THSD1Q9NS62 852 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 NDFIP2Q9NV92 336 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 ATMQ13315 3056 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 MGAQ8IWI9 3026 aa13.93□□□□□ -0.18
SCAMP4-206ENST00000460767 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 EIF3CLB5ME19 914 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 TRIM38O00635 465 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 SIGLEC6O43699 453 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 LCA5LO95447 670 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 CD160O95971 181 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 CKMT1AP12532 417 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 RHOQP17081 205 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 PSMA2P25787 234 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 IL1R2P27930 398 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 HTR7P34969 479 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 GABREP78334 506 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 SULT2A1Q06520 285 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 SRSF1Q07955 248 aaKnown RBP eCLIP13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 ZNF177Q13360 481 aaPredicted RBP13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 LY6DQ14210 128 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 ELAVL3Q14576 367 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 TCEAL1Q15170 157 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 CCDC122Q5T0U0 273 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 LRRC31Q6UY01 552 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 TRIM69Q86WT6 500 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 MMAAQ8IVH4 418 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 PYROXD2Q8N2H3 581 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 DCAF4L2Q8NA75 395 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 PTPRN2Q92932 1015 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 FAM129BQ96TA1 746 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 EIF3CQ99613 913 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 PACSIN1Q9BY11 444 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 MTG2Q9H4K7 406 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 USP29Q9HBJ7 922 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 SLCO3A1Q9UIG8 710 aa13.92□□□□□ -0.18
SCAMP4-206ENST00000460767 AKR1B15C9JRZ8 316 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 SLC28A2O43868 658 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 OPA1O60313 960 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 RNGTTO60942 597 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 ZNF821O75541 412 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 MTA2O94776 668 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 MPOP05164 745 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 TCF4P15884 667 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 MIPP30301 263 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 DRD3P35462 400 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 MLLT3P42568 568 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 MAPKAPK2P49137 400 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 STK19P49842 368 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 PPP2CBP62714 309 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 PPP2CAP67775 309 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 SLC25A11Q02978 314 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 CA9Q16790 459 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 TFAP2DQ7Z6R9 452 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 PRPF39Q86UA1 669 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 OR14C36Q8NHC7 312 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 FAM71BQ8TC56 605 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 CCDC97Q96F63 343 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 PPP1R9BQ96SB3 815 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 KLC2Q9H0B6 622 aa13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 NHEJ1Q9H9Q4 299 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-206ENST00000460767 TTC34A8MYJ7 566 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 KLK10O43240 276 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 PLRG1O43660 514 aaKnown RBP13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 SRGAP2O75044 1071 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 MOCS3O95396 460 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 MT-CO1P00395 513 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 TMEM253P0C7T8 217 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 GIMD1P0DJR0 217 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 ARF5P84085 180 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 DAB2P98082 770 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 PIGHQ14442 188 aaPredicted RBP13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 DPYSL2Q16555 572 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 HS1BP3Q53T59 392 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 EFHC2Q5JST6 749 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 RNF219Q5W0B1 726 aaPredicted RBP13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 XKR5Q6UX68 686 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 SLC25A45Q8N413 288 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 SH2D3CQ8N5H7 860 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 RTL3Q8N8U3 475 aaKnown RBP13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 TMEM145Q8NBT3 493 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 TBC1D31Q96DN5 1066 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 NCAPGQ9BPX3 1015 aa13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 SNRNP25Q9BV90 132 aaKnown RBP13.9□□□□□ -0.18
SCAMP4-206ENST00000460767 NUP85Q9BW27 656 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms