RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 SLC1A1P43005 524 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 NOP2P46087 812 aaKnown RBP15.16■□□□□ 0.02
ATG4B-213ENST00000460211 GRIA4P48058 902 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 CSNK1EP49674 416 aaKnown RBP15.16■□□□□ 0.02
ATG4B-213ENST00000460211 C21orf59P57076 290 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 GRIK2Q13002 908 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 GRM3Q14832 879 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 CYTH1Q15438 398 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 SETMARQ53H47 684 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-213ENST00000460211 ODF2Q5BJF6 829 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 ZNF805Q5CZA5 627 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 ATXN7L2Q5T6C5 722 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-213ENST00000460211 PIP5KL1Q5T9C9 394 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 TMCO4Q5TGY1 634 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 GDPD4Q6W3E5 623 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 TRIM69Q86WT6 500 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 LRRC49Q8IUZ0 686 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 ARHGAP12Q8IWW6 846 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 BBS5Q8N3I7 341 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 MINDY1Q8N5J2 469 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 OR6K2Q8NGY2 324 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 C1orf216Q8TAB5 229 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 RAB7BQ96AH8 199 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 CINPQ9BW66 212 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-213ENST00000460211 AASDHPPTQ9NRN7 309 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 LHX6Q9UPM6 363 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 DMTF1Q9Y222 760 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 MFHAS1Q9Y4C4 1052 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 DMXL2Q8TDJ6 3036 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 NBEAQ8NFP9 2946 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 LATO43561 262 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 RNGTTO60942 597 aaKnown RBP15.15■□□□□ 0.02
ATG4B-213ENST00000460211 PCDH8O95206 1070 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 CER1O95813 267 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 UGT2B4P06133 528 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 ADRB3P13945 408 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 RENBPP51606 427 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 TCEAL1Q15170 157 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 ZSCAN30Q86W11 494 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 NPWQ8N729 165 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 FAM71BQ8TC56 605 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 FEM1CQ96JP0 617 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 SERAC1Q96JX3 654 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 ZNF599Q96NL3 588 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 ZNF670Q9BS34 389 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 CPEB1Q9BZB8 566 aaKnown RBP15.15■□□□□ 0.02
ATG4B-213ENST00000460211 PDFQ9HBH1 243 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 SEPT3Q9UH03 358 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 NEUROG3Q9Y4Z2 214 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 PCDHA13Q9Y5I0 950 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 CACNA1EQ15878 2313 aa15.15■□□□□ 0.02
ATG4B-213ENST00000460211 A0A1B0GVT2 93 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 NEMP1O14524 444 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 VILLO15195 856 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 MAGEC1O60732 1142 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 LCA5LO95447 670 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 XPAP23025 273 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-213ENST00000460211 CDC25BP30305 580 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 MAT2AP31153 395 aaKnown RBP15.14■□□□□ 0.01
ATG4B-213ENST00000460211 GKP32189 559 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 TAS2R38P59533 333 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 TAS2R40P59535 323 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 FAM193AP78312 1265 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 DPYSL3Q14195 570 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 STAT4Q14765 748 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 ATP13A4Q4VNC1 1196 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 CFAP58Q5T655 872 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 NAPEPLDQ6IQ20 393 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 PIP4P1Q86T03 277 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 TTC7BQ86TV6 843 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 HORMAD1Q86X24 394 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 ATPAF2Q8N5M1 289 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 OR2I1PQ8NGU4 316 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 TSC1Q92574 1164 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 KLHL32Q96NJ5 620 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 DNAAF2Q9NVR5 837 aaKnown RBP15.14■□□□□ 0.01
ATG4B-213ENST00000460211 IMPACTQ9P2X3 320 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 ANKRD6Q9Y2G4 727 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 MSRB2Q9Y3D2 182 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 EPN1Q9Y6I3 576 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-213ENST00000460211 CHD5Q8TDI0 1954 aa15.14■□□□□ 0.01
ATG4B-213ENST00000460211 PCNX2A6NKB5 2137 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 A0A1W2PQU0 124 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 C16orf96A6NNT2 1141 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 PRAMEF26H0Y7S4 382 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 TSPAN6O43657 245 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 AP1G1O43747 822 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 SPOPO43791 374 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 DFNA5O60443 496 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 IL4RP24394 825 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 CD38P28907 300 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 HSPA9P38646 679 aaKnown RBP15.13■□□□□ 0.01
ATG4B-213ENST00000460211 CSNK1DP48730 415 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 ARSEP51690 589 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 PPP2CBP62714 309 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 RPS21P63220 83 aaKnown RBP15.13■□□□□ 0.01
ATG4B-213ENST00000460211 PPP2CAP67775 309 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 NSUN2Q08J23 767 aaKnown RBP eCLIP15.13■□□□□ 0.01
ATG4B-213ENST00000460211 MMRN1Q13201 1228 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 SLC14A1Q13336 389 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms