RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 F5H423 210 aaPredicted RBP10.53□□□□□ -0.72
HERC4-207ENST00000460168 AP3B1O00203 1094 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 MTSS1O43312 755 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 METTL18O95568 372 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 SHBGP04278 402 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 MYOGP15173 224 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 ELF3P78545 371 aaPredicted RBP10.53□□□□□ -0.72
HERC4-207ENST00000460168 LACTB2Q53H82 288 aaPredicted RBP10.53□□□□□ -0.72
HERC4-207ENST00000460168 EGFLAMQ63HQ2 1017 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 FBXL22Q6P050 247 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 ELMOD1Q8N336 334 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 MRPL43Q8N983 215 aaKnown RBP10.53□□□□□ -0.72
HERC4-207ENST00000460168 KREMEN2Q8NCW0 462 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 SPPL3Q8TCT6 385 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 SIKE1Q9BRV8 207 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 NINJ2Q9NZG7 142 aa10.53□□□□□ -0.72
HERC4-207ENST00000460168 KLHL8Q9P2G9 620 aaPredicted RBP10.53□□□□□ -0.72
HERC4-207ENST00000460168 SHROOM3Q8TF72 1996 aa10.52□□□□□ -0.72
HERC4-207ENST00000460168 A0A1W2PQ67 120 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 A0A1W2PRQ8 180 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 C2orf71A6NGG8 1288 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 GRXCR1A8MXD5 290 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 CDK2AP1O14519 115 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 HNRNPRO43390 633 aaKnown RBP10.52□□□□□ -0.73
HERC4-207ENST00000460168 BANF1O75531 89 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 OAS1P00973 400 aaKnown RBP10.52□□□□□ -0.73
HERC4-207ENST00000460168 ALADP13716 330 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 SLC11A2P49281 568 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 SKOR1P84550 965 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 LSAMPQ13449 338 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 SEPT6Q14141 434 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 FASTKD3Q14CZ7 662 aaKnown RBP10.52□□□□□ -0.73
HERC4-207ENST00000460168 C9orf50Q5SZB4 431 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 FNBP1LQ5T0N5 605 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 IL23RQ5VWK5 629 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 SIGIRRQ6IA17 410 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 LILRA6Q6PI73 481 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 PID1Q7Z2X4 250 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 SPRED2Q7Z698 418 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 ZNF567Q8N184 647 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 PLD4Q96BZ4 506 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 ITPKCQ96DU7 683 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 CFAP36Q96G28 342 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 TTC25Q96NG3 672 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 RNF38Q9H0F5 515 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 ZNF334Q9HCZ1 680 aaPredicted RBP10.52□□□□□ -0.73
HERC4-207ENST00000460168 FANCFQ9NPI8 374 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 PPARGC1AQ9UBK2 798 aaKnown RBP10.52□□□□□ -0.73
HERC4-207ENST00000460168 ZNF711Q9Y462 761 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 NOX1Q9Y5S8 564 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 CLUHO75153 1309 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 IGLV3-10A0A075B6K4 115 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 SMIM23A6NLE4 172 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 F5H5T6 163 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 KMOO15229 486 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 CA3P07451 260 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 IRF1P10914 325 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 MBL2P11226 248 aaPredicted RBP10.52□□□□□ -0.73
HERC4-207ENST00000460168 PCNAP12004 261 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 RHOQP17081 205 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 DDX5P17844 614 aaKnown RBP10.52□□□□□ -0.73
HERC4-207ENST00000460168 SP100P23497 879 aaPredicted RBP10.52□□□□□ -0.73
HERC4-207ENST00000460168 DNAJB1P25685 340 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 PTPN3P26045 913 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 GABRR2P28476 465 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 FDFT1P37268 417 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 HSD17B7P56937 341 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 GNGT1P63211 74 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 UBE3AQ05086 875 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 ALFQ53S48 1182 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 RNF187Q5TA31 235 aaPredicted RBP10.52□□□□□ -0.73
HERC4-207ENST00000460168 NDUFAF5Q5TEU4 345 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 KCTD16Q68DU8 428 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 ANO7Q6IWH7 933 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 NLRP14Q86W24 1093 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 ANKMY2Q8IV38 441 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 DENND1CQ8IV53 801 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 ARHGAP12Q8IWW6 846 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 PYROXD1Q8WU10 500 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 PEX13Q92968 403 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 ARL8AQ96BM9 186 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 RBM14Q96PK6 669 aaKnown RBP10.52□□□□□ -0.73
HERC4-207ENST00000460168 TUBGCP5Q96RT8 1024 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 FAM117AQ9C073 453 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 SLC39A8Q9C0K1 460 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 VCXQ9H320 206 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 SERHL2Q9H4I8 314 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 GKN1Q9NS71 199 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 SMPD4Q9NXE4 827 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 TSC22D4Q9Y3Q8 395 aa10.52□□□□□ -0.73
HERC4-207ENST00000460168 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.52□□□□□ -0.73
HERC4-207ENST00000460168 CHD9Q3L8U1 2897 aa10.51□□□□□ -0.73
HERC4-207ENST00000460168 DOCK4Q8N1I0 1966 aa10.51□□□□□ -0.73
HERC4-207ENST00000460168 ANAPC1Q9H1A4 1944 aa10.51□□□□□ -0.73
HERC4-207ENST00000460168 KANSL1LA0AUZ9 987 aa10.51□□□□□ -0.73
HERC4-207ENST00000460168 TLDC2A0PJX2 215 aa10.51□□□□□ -0.73
HERC4-207ENST00000460168 ACSL4O60488 711 aa10.51□□□□□ -0.73
HERC4-207ENST00000460168 STC2O76061 302 aa10.51□□□□□ -0.73
HERC4-207ENST00000460168 CNTN5O94779 1100 aa10.51□□□□□ -0.73
HERC4-207ENST00000460168 OXSR1O95747 527 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms