RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 NEUROG2Q9H2A3 272 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 CCDC86Q9H6F5 360 aaKnown RBP14.81□□□□□ -0.04
USP39-206ENST00000448971 LRRC19Q9H756 370 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 UBA2Q9UBT2 640 aaPredicted RBP14.81□□□□□ -0.04
USP39-206ENST00000448971 SARDHQ9UL12 918 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 PPM1HQ9ULR3 514 aa14.81□□□□□ -0.04
USP39-206ENST00000448971 APOBEC2Q9Y235 224 aaKnown RBP14.81□□□□□ -0.04
USP39-206ENST00000448971 HELZ2Q9BYK8 2649 aaKnown RBP14.81□□□□□ -0.04
USP39-206ENST00000448971 LEFTY1O75610 366 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 DKK1O94907 266 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 CD160O95971 181 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 IGSF6O95976 241 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 CTSLP07711 333 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 ZNF883P0CG24 379 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 DRD3P35462 400 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 NOP2P46087 812 aaKnown RBP14.8□□□□□ -0.04
USP39-206ENST00000448971 TAS2R40P59535 323 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 SNRPD1P62314 119 aaKnown RBP14.8□□□□□ -0.04
USP39-206ENST00000448971 NCEH1Q6PIU2 408 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.8□□□□□ -0.04
USP39-206ENST00000448971 POLNQ7Z5Q5 900 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 PDZD3Q86UT5 571 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 TMTC1Q8IUR5 882 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 NETO2Q8NC67 525 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 OR2AP1Q8NGE2 309 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 OR2T34Q8NGX1 318 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 BAHD1Q8TBE0 780 aaPredicted RBP14.8□□□□□ -0.04
USP39-206ENST00000448971 GDAP1L1Q96MZ0 367 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 HEPHQ9BQS7 1158 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 SLC39A8Q9C0K1 460 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 KLC2Q9H0B6 622 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 GAREM1Q9H706 876 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 TOR4AQ9NXH8 423 aa14.8□□□□□ -0.04
USP39-206ENST00000448971 RCOR3Q9P2K3 495 aaPredicted RBP14.8□□□□□ -0.04
USP39-206ENST00000448971 HECAQ9UBI9 543 aaPredicted RBP14.8□□□□□ -0.04
USP39-206ENST00000448971 EIF2B4Q9UI10 523 aaKnown RBP14.8□□□□□ -0.04
USP39-206ENST00000448971 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.8□□□□□ -0.04
USP39-206ENST00000448971 KRIT1O00522 736 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 SLC7A4O43246 635 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 SPOPO43791 374 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 ZNF821O75541 412 aaPredicted RBP14.79□□□□□ -0.04
USP39-206ENST00000448971 MTA2O94776 668 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 NDUFA10O95299 355 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 GSRP00390 522 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 CD48P09326 243 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 AMPD1P23109 780 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 ARHGAP25P42331 645 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 PAPOLAP51003 745 aaKnown RBP14.79□□□□□ -0.04
USP39-206ENST00000448971 CNTN1Q12860 1018 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 COL28A1Q2UY09 1125 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 ARSIQ5FYB1 569 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 ATXN7L2Q5T6C5 722 aaPredicted RBP14.79□□□□□ -0.04
USP39-206ENST00000448971 AGBL4Q5VU57 503 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 KIAA0895LQ68EN5 471 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 TMPRSS7Q7RTY8 843 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 MAP7D3Q8IWC1 876 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 ARHGAP12Q8IWW6 846 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 ATPAF2Q8N5M1 289 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 LZTR1Q8N653 840 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 KCTD6Q8NC69 237 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 TMIEQ8NEW7 156 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 MDM1Q8TC05 714 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 ISG20Q96AZ6 181 aaKnown RBP14.79□□□□□ -0.04
USP39-206ENST00000448971 EXOC2Q96KP1 924 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 ZNF670Q9BS34 389 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 TM7SF3Q9NS93 570 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 IMPACTQ9P2X3 320 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 FNDC3AQ9Y2H6 1198 aaKnown RBP14.79□□□□□ -0.04
USP39-206ENST00000448971 MFHAS1Q9Y4C4 1052 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 PCDHA13Q9Y5I0 950 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 WASF2Q9Y6W5 498 aa14.79□□□□□ -0.04
USP39-206ENST00000448971 LRRD1A4D1F6 860 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 J3KR12 359 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 BCAT2O15382 392 aaPredicted RBP14.78□□□□□ -0.04
USP39-206ENST00000448971 PLRG1O43660 514 aaKnown RBP14.78□□□□□ -0.04
USP39-206ENST00000448971 PRAMEF11O60813 436 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 LCA5LO95447 670 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 KRT1P04264 644 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 TNNT1P13805 278 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 FECHP22830 423 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 NEK3P51956 506 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 CCDC15Q0P6D6 951 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 MMRN1Q13201 1228 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 DPYSL3Q14195 570 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 PDK2Q15119 407 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 HLA-BQ31612 363 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 ATP13A4Q4VNC1 1196 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 INO80DQ53TQ3 878 aaPredicted RBP14.78□□□□□ -0.04
USP39-206ENST00000448971 ODF2Q5BJF6 829 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 SETD7Q8WTS6 366 aaKnown RBP14.78□□□□□ -0.04
USP39-206ENST00000448971 ARRDC3Q96B67 414 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 BIRC7Q96CA5 298 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 BAG1Q99933 345 aaPredicted RBP14.78□□□□□ -0.04
USP39-206ENST00000448971 CINPQ9BW66 212 aaPredicted RBP14.78□□□□□ -0.04
USP39-206ENST00000448971 OCEL1Q9H607 264 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 PDFQ9HBH1 243 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 ETNK2Q9NVF9 386 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 DKK4Q9UBT3 224 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 CHD5Q8TDI0 1954 aa14.78□□□□□ -0.04
USP39-206ENST00000448971 FLNBO75369 2602 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms