RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PAQR7Q86WK9 346 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 DQX1Q8TE96 717 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 KCNJ9Q92806 393 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ARRDC3Q96B67 414 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CEP295NLQ96MC4 621 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CARS2Q9HA77 564 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 MID2Q9UJV3 735 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 BAG5Q9UL15 447 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 SCN9AQ15858 1988 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 MYO18AQ92614 2054 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CDC14CA4D256 554 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 DLX3O60479 287 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 TCEA1P23193 301 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ABL2P42684 1182 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 TPD52P55327 224 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 GABREP78334 506 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ADAM15Q13444 863 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 NFIL3Q16649 462 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 SMTNL2Q2TAL5 461 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 FHL5Q5TD97 284 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 STPG1Q5TH74 334 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 TRIM68Q6AZZ1 485 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZSCAN30Q86W11 494 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 SPEM1Q8N4L4 309 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZADH2Q8N4Q0 377 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 FCRL3Q96P31 734 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 SLC2A11Q9BYW1 496 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZDHHC5Q9C0B5 715 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CYP4F12Q9HCS2 524 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 GTSE1Q9NYZ3 720 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 AGO1Q9UL18 857 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CRYL1Q9Y2S2 319 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 GTPBP10A4D1E9 387 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ALOX15P16050 662 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 FECHP22830 423 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 SESN2P58004 480 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 KCNJ2P63252 427 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ALG11Q2TAA5 492 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 PLA2G4EQ3MJ16 856 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 UGT3A1Q6NUS8 523 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 SYT12Q8IV01 421 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 TOE1Q96GM8 510 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 NHEJ1Q9H9Q4 299 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 TM7SF3Q9NS93 570 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 GPATCH2LQ9NWQ4 482 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 WDR27A2RRH5 827 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 URADA6NGE7 173 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 TAC1P20366 129 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ACTR1BP42025 376 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ACTR1AP61163 376 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 RPP38P78345 283 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 HYAL1Q12794 435 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 CDKN3Q16667 212 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 UGP2Q16851 508 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 HSF5Q4G112 596 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 NXNQ6DKJ4 435 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ACAD10Q6JQN1 1059 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 C10orf67Q8IYJ2 551 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 CNPY4Q8N129 248 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 MGARPQ8TDB4 240 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 JADE3Q92613 823 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 RPL10LQ96L21 214 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 OSBPL6Q9BZF3 934 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 TWSG1Q9GZX9 223 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 KCNK9Q9NPC2 374 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 STMN3Q9NZ72 180 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 OR56A5P0C7T3 313 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 RBP3P10745 1247 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ALDH18A1P54886 795 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 NCALDP61601 193 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 PDAP1Q13442 181 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 C4orf17Q53FE4 359 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 PRAMEF14Q5SWL7 426 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 HYIQ5T013 277 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ERMARDQ5T6L9 678 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 IZUMO3Q5VZ72 239 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 CRTC3Q6UUV7 619 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 C12orf56Q8IXR9 622 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 MINDY1Q8N5J2 469 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 RNF31Q96EP0 1072 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 TMPRSS4Q9NRS4 437 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 SCML1Q9UN30 329 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 NUP188Q5SRE5 1749 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 USP12O75317 370 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 OAZ2O95190 189 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 SLC25A14O95258 325 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 FESP07332 822 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 BNC1Q01954 994 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 C1QBPQ07021 282 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 GBP5Q96PP8 586 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 YIPF4Q9BSR8 244 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.69□□□□□ -1.56e-9■■■□□ 16.6
CDC42BPA-209ENST00000448940 FBXW2Q9UKT8 454 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 TRGV8A0A0C4DH27 118 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 POLR1CO15160 346 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 CST8O60676 142 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 DAB1O75553 588 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 COX6B1P14854 86 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 NUDT1P36639 197 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 SF3A2Q15428 464 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms