RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 PRSS16Q9NQE7 514 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 DNPEPQ9ULA0 475 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 FANCMQ8IYD8 2048 aa11.75□□□□□ -0.53
LINC00408-201ENST00000447784 A0A1W2PQF6 199 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 C1QTNF3-AMACRE9PGA6 284 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 ALOX15BO15296 676 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 FOXD2O60548 495 aaPredicted RBP11.74□□□□□ -0.53
LINC00408-201ENST00000447784 RHOBTB1O94844 696 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 IFNB1P01574 187 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 IL1BP01584 269 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 PRNPP04156 253 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 ITGAVP06756 1048 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 ACADMP11310 421 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 CHRNA3P32297 505 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 P2RY2P41231 377 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 TNNT3P45378 269 aaPredicted RBP11.74□□□□□ -0.53
LINC00408-201ENST00000447784 CSNK1DP48730 415 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 CCNHP51946 323 aaPredicted RBP11.74□□□□□ -0.53
LINC00408-201ENST00000447784 AP1S1P61966 158 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 CAMK2GQ13555 558 aaPredicted RBP11.74□□□□□ -0.53
LINC00408-201ENST00000447784 PRPSAP1Q14558 356 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 GRM3Q14832 879 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 ELF2Q15723 593 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 PLK5Q496M5 336 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 TEX44Q53QW1 395 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 RALGPS1Q5JS13 557 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 ATXN7L2Q5T6C5 722 aaPredicted RBP11.74□□□□□ -0.53
LINC00408-201ENST00000447784 ZNF776Q68DI1 518 aaPredicted RBP11.74□□□□□ -0.53
LINC00408-201ENST00000447784 KIAA1211LQ6NV74 962 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 DRICH1Q6PGQ1 229 aaPredicted RBP11.74□□□□□ -0.53
LINC00408-201ENST00000447784 ARHGEF18Q6ZSZ5 1173 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 SRLQ86TD4 932 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 KBTBD6Q86V97 674 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 KIAA2013Q8IYS2 634 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 STK40Q8N2I9 435 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00408-201ENST00000447784 PRELID2Q8N945 189 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 TSEN2Q8NCE0 465 aaKnown RBP11.74□□□□□ -0.53
LINC00408-201ENST00000447784 HMGB4Q8WW32 186 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 LRIG1Q96JA1 1093 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 EXOC2Q96KP1 924 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 IL12RB2Q99665 862 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 TMEM121Q9BTD3 319 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 CEP41Q9BYV8 373 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 TPSD1Q9BZJ3 242 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 DUSP15Q9H1R2 295 aaPredicted RBP11.74□□□□□ -0.53
LINC00408-201ENST00000447784 ZDHHC6Q9H6R6 413 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 C10orf88Q9H8K7 445 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 DYRK4Q9NR20 520 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 SMARCAL1Q9NZC9 954 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 LHX3Q9UBR4 397 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 IL36AQ9UHA7 158 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 CDC23Q9UJX2 597 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 DRG1Q9Y295 367 aaKnown RBP11.74□□□□□ -0.53
LINC00408-201ENST00000447784 PCDHGA5Q9Y5G8 931 aa11.74□□□□□ -0.53
LINC00408-201ENST00000447784 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.73□□□□□ -0.53
LINC00408-201ENST00000447784 FANCGO15287 622 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 ZNF500O60304 480 aaPredicted RBP11.73□□□□□ -0.53
LINC00408-201ENST00000447784 EPN2O95208 641 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 DNTTP04053 509 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 DMDP11532 3685 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 CA4P22748 312 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 PTPN3P26045 913 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 SERPINA4P29622 427 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 MAXP61244 160 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 ZBTB16Q05516 673 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 BCL2L1Q07817 233 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 CCDC15Q0P6D6 951 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 ZBTB17Q13105 803 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 SIX1Q15475 284 aaPredicted RBP11.73□□□□□ -0.53
LINC00408-201ENST00000447784 CSRP2Q16527 193 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 WHAMMP3Q1A5X7 153 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 KIAA1324Q6UXG2 1013 aaKnown RBP11.73□□□□□ -0.53
LINC00408-201ENST00000447784 TMPRSS6Q8IU80 811 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 MMAAQ8IVH4 418 aaKnown RBP11.73□□□□□ -0.53
LINC00408-201ENST00000447784 MNS1Q8NEH6 495 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 TMIEQ8NEW7 156 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 OR6K2Q8NGY2 324 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 ATL2Q8NHH9 583 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 GRIN3AQ8TCU5 1115 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 GRK7Q8WTQ7 553 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 LRRC45Q96CN5 670 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 SIPA1Q96FS4 1042 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 PPP1R16AQ96I34 528 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 TEKT5Q96M29 485 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 SPATA13Q96N96 652 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 RUNDC3BQ96NL0 473 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 PPP1R2P1Q96PQ5 205 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 NUDCD1Q96RS6 583 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 TUBGCP5Q96RT8 1024 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 SEMA3CQ99985 751 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 MGME1Q9BQP7 344 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 OSBPL1AQ9BXW6 950 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 RSPH9Q9H1X1 276 aaPredicted RBP11.73□□□□□ -0.53
LINC00408-201ENST00000447784 ATP13A3Q9H7F0 1226 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 PARD6AQ9NPB6 346 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 RSPH14Q9UHP6 348 aa11.73□□□□□ -0.53
LINC00408-201ENST00000447784 EVLQ9UI08 416 aaPredicted RBP11.73□□□□□ -0.53
LINC00408-201ENST00000447784 NCKAP1Q9Y2A7 1128 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms