RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 BEX3Q00994 111 aa16.8■□□□□ 0.28
TCOF1-206ENST00000445265 GRM3Q14832 879 aa16.8■□□□□ 0.28
TCOF1-206ENST00000445265 ISLR2Q6UXK2 745 aa16.8■□□□□ 0.28
TCOF1-206ENST00000445265 MICU2Q8IYU8 434 aa16.8■□□□□ 0.28
TCOF1-206ENST00000445265 PCSK9Q8NBP7 692 aaKnown RBP16.8■□□□□ 0.28
TCOF1-206ENST00000445265 HGH1Q9BTY7 390 aa16.8■□□□□ 0.28
TCOF1-206ENST00000445265 DPY30Q9C005 99 aa16.8■□□□□ 0.28
TCOF1-206ENST00000445265 DPEP3Q9H4B8 488 aa16.8■□□□□ 0.28
TCOF1-206ENST00000445265 PIF1Q9H611 641 aa16.8■□□□□ 0.28
TCOF1-206ENST00000445265 VPS45Q9NRW7 570 aa16.8■□□□□ 0.28
TCOF1-206ENST00000445265 MARCH2Q9P0N8 246 aa16.8■□□□□ 0.28
TCOF1-206ENST00000445265 RAD51BO15315 384 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 CYP3A5P20815 502 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 DMC1Q14565 340 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 STXBP5Q5T5C0 1151 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 SPATA6LQ8N4H0 392 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 ZNF781Q8N8C0 355 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 ATP13A1Q9HD20 1204 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 DYTNA2CJ06 578 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 E7ESA3 106 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 ONECUT3O60422 494 aaPredicted RBP16.79■□□□□ 0.28
TCOF1-206ENST00000445265 MMP3P08254 477 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 SLC2A4P14672 509 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 PTPN3P26045 913 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 S100A5P33763 92 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 FCGRTP55899 365 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 MRPS6P82932 125 aaKnown RBP16.79■□□□□ 0.28
TCOF1-206ENST00000445265 TRIM16LQ309B1 348 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 SZRD1Q7Z422 152 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 GPR142Q7Z601 462 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 ZDHHC14Q8IZN3 488 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 NDRG1Q92597 394 aaKnown RBP16.79■□□□□ 0.28
TCOF1-206ENST00000445265 FAM120BQ96EK7 910 aaKnown RBP16.79■□□□□ 0.28
TCOF1-206ENST00000445265 FCRL2Q96LA5 508 aaPredicted RBP16.79■□□□□ 0.28
TCOF1-206ENST00000445265 UGT2B28Q9BY64 529 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 EPB41L4BQ9H329 900 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 PNPLA3Q9NST1 481 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 STK39Q9UEW8 545 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 SH3BP1Q9Y3L3 701 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 LRRC42Q9Y546 428 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 NUMBP49757 651 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 FAM187BQ17R55 369 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 SLC9A4Q6AI14 798 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 ACOX2Q99424 681 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 ZCWPW1Q9H0M4 648 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 UBA2Q9UBT2 640 aaPredicted RBP16.79■□□□□ 0.28
TCOF1-206ENST00000445265 CNTN6Q9UQ52 1028 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 POMPQ9Y244 141 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 LZTS1Q9Y250 596 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 MRPL42Q9Y6G3 142 aaKnown RBP16.79■□□□□ 0.28
TCOF1-206ENST00000445265 KRT6AP02538 564 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 KRT6BP04259 564 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 FMO4P31512 558 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 KRT6CP48668 564 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 IL2P60568 153 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 PSMD5Q16401 504 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 DENND1AQ8TEH3 1009 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 UROC1Q96N76 676 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 ZNF570Q96NI8 536 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 DACH2Q96NX9 599 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 VPS28Q9UK41 221 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 KCNH4Q9UQ05 1017 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 TRAF6Q9Y4K3 522 aa16.79■□□□□ 0.28
TCOF1-206ENST00000445265 ITGB4P16144 1822 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 GRIN3BO60391 1043 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 ZNF7P17097 686 aaPredicted RBP16.78■□□□□ 0.28
TCOF1-206ENST00000445265 SLC5A9Q2M3M2 681 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 RBM44Q6ZP01 1051 aaKnown RBP16.78■□□□□ 0.28
TCOF1-206ENST00000445265 CUZD1Q86UP6 607 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 STK32CQ86UX6 486 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 GPSM1Q86YR5 675 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 NPAS2Q99743 824 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 SEMA4BQ9NPR2 832 aaPredicted RBP16.78■□□□□ 0.28
TCOF1-206ENST00000445265 FAM50BQ9Y247 325 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 GIT1Q9Y2X7 761 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 TRAF2Q12933 501 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 RALGPS1Q5JS13 557 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 RAB26Q9ULW5 256 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 MYH7BA7E2Y1 1941 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 PEX1O43933 1283 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 NRP2O60462 931 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 DPYSQ14117 519 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 SH3D19Q5HYK7 790 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 KIAA0408Q6ZU52 694 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 LGI2Q8N0V4 545 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 MPP5Q8N3R9 675 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 RAET1EQ8TD07 263 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 TRPC4APQ8TEL6 797 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 TCF12Q99081 682 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 ACTR8Q9H981 624 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 LMCD1Q9NZU5 365 aa16.78■□□□□ 0.28
TCOF1-206ENST00000445265 TNPO3Q9Y5L0 923 aaKnown RBP16.78■□□□□ 0.28
TCOF1-206ENST00000445265 ALDH1A1P00352 501 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 HTR7P34969 479 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 RAP1GDS1P52306 607 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 ATXN1P54253 815 aaKnown RBP16.77■□□□□ 0.28
TCOF1-206ENST00000445265 CLDN10P78369 228 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 CCDC81Q6ZN84 652 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 ENDOVQ8N8Q3 282 aaKnown RBP16.77■□□□□ 0.28
TCOF1-206ENST00000445265 DACT3Q96B18 629 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms