RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-208	ENST00000444677	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	LAMA1	P25391	3075 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	GON4L	Q3T8J9	2241 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	SLC31A1	O15431	190 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	MFSD11	O43934	449 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	MAFK	O60675	156 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	OPHN1	O60890	802 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	PALM	O75781	387 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	PCDH8	O95206	1070 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	CD59	P13987	128 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	TIMP2	P16035	220 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	CYLC1	P35663	651 aa	Predicted RBP	13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	ARHGAP25	P42331	645 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	PI4KA	P42356	2102 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	NOP2	P46087	812 aa	Known RBP	13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	AFF3	P51826	1226 aa	Known RBP	13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	RACK1	P63244	317 aa	Known RBP	13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	SLC10A7	Q0GE19	358 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	FGL2	Q14314	439 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	NUMA1	Q14980	2115 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	TCEAL1	Q15170	157 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	ZNF284	Q2VY69	593 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	HLA-B	Q31612	363 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	PPM1J	Q5JR12	505 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	ZFYVE27	Q5T4F4	411 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	FBXL19	Q6PCT2	694 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	PRPF39	Q86UA1	669 aa	Known RBP	13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	TRIM69	Q86WT6	500 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	HORMAD1	Q86X24	394 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	CAMK1D	Q8IU85	385 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	CCDC170	Q8IYT3	715 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	ACRBP	Q8NEB7	543 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	GAREM1	Q9H706	876 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	CAAP1	Q9H8G2	361 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	PREB	Q9HCU5	417 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	SALL4	Q9UJQ4	1053 aa		13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.71	□□□□□ -0.21
GARNL3-208	ENST00000444677	C3orf70	A6NLC5	250 aa	Predicted RBP	13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677		H0Y8X5	98 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	KCNK5	O95279	499 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	NDUFA10	O95299	355 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	PRKCG	P05129	697 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	KRT7	P08729	469 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	COMT	P21964	271 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	CD38	P28907	300 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	CTSK	P43235	329 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	GRIA4	P48058	902 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	SEMG2	Q02383	582 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	SLC10A2	Q12908	348 aa	Predicted RBP	13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	LBR	Q14739	615 aa	Known RBP	13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	PDK2	Q15119	407 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	NAPEPLD	Q6IQ20	393 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	KDM7A	Q6ZMT4	941 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	ADAT2	Q7Z6V5	191 aa	Known RBP	13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	SRL	Q86TD4	932 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	TTC7B	Q86TV6	843 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	ZSWIM9	Q86XI8	627 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	TMTC1	Q8IUR5	882 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	TMEM139	Q8IV31	216 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	PGBD5	Q8N414	524 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	DEFB124	Q8NES8	71 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	RNF25	Q96BH1	459 aa	Predicted RBP	13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	FAF2	Q96CS3	445 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	LRIG1	Q96JA1	1093 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	CAMK1G	Q96NX5	476 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	ZNF670	Q9BS34	389 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	CINP	Q9BW66	212 aa	Predicted RBP	13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	DNAAF2	Q9NVR5	837 aa	Known RBP	13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	ALG6	Q9Y672	507 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	DUSP10	Q9Y6W6	482 aa		13.7	□□□□□ -0.22
GARNL3-208	ENST00000444677	TP53BP1	Q12888	1972 aa	Predicted RBP	13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677		A0A0U1RQJ8	604 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	LRRD1	A4D1F6	860 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	IGLON5	A6NGN9	336 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	VILL	O15195	856 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	RAD51B	O15315	384 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	SH3BP5	O60239	455 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	CDC25B	P30305	580 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	SCNN1B	P51168	640 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	CLDN2	P57739	230 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	IL9R	Q01113	521 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	GBE1	Q04446	702 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	RAD51	Q06609	339 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	CCDC15	Q0P6D6	951 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	PAFAH1B3	Q15102	231 aa	Known RBP	13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	LLGL1	Q15334	1064 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	SPA17	Q15506	151 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	TEAD4	Q15561	434 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	TMEM259	Q4ZIN3	620 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	TMCO4	Q5TGY1	634 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	PIP4P1	Q86T03	277 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	SPATS2	Q86XZ4	545 aa	Known RBP	13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	ATPAF2	Q8N5M1	289 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	RNF157	Q96PX1	679 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	CPEB1	Q9BZB8	566 aa	Known RBP	13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	ZDHHC5	Q9C0B5	715 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	LACRT	Q9GZZ8	138 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	SUV39H2	Q9H5I1	410 aa		13.69	□□□□□ -0.22
GARNL3-208	ENST00000444677	LCMT1	Q9UIC8	334 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms