RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 FUNDC2Q9BWH2 189 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 ACE2Q9BYF1 805 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 CYP4F12Q9HCS2 524 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 FBXO28Q9NVF7 368 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 EXD2Q9NVH0 621 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 TCRBV5S1A1TA0A578 114 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 DHRS12A0PJE2 317 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 MTHFD1P11586 935 aaKnown RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 TSPAN8P19075 237 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 IL10P22301 178 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 CCND2P30279 289 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 FAAH2Q6GMR7 532 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 TIFABQ6ZNK6 161 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 PRR23CQ6ZRP0 262 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 ZBTB33Q86T24 672 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 ADCK1Q86TW2 530 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 CMTR2Q8IYT2 770 aaKnown RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 CMASQ8NFW8 434 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 OR13F1Q8NGS4 319 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 UBA3Q8TBC4 463 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 ZNF669Q96BR6 464 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 UNC93B1Q9H1C4 597 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 MOCS1Q9NZB8 636 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 RAP2CQ9Y3L5 183 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 DDTLA6NHG4 134 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 SPDYE2BA6NHP3 402 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 SPDYE6P0CI01 402 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 PDGFRAP16234 1089 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 OXTRP30559 389 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 ANGPT1Q15389 498 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 C11orf74Q86VG3 221 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 TTC30BQ8N4P2 665 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 ACMSDQ8TDX5 336 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 APBB2Q92870 758 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 SLC45A3Q96JT2 553 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 RNF157Q96PX1 679 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 CDK5RAP1Q96SZ6 601 aaKnown RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 ADPGKQ9BRR6 497 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 TDRD1Q9BXT4 1180 aaKnown RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 HOXD1Q9GZZ0 328 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 CACNA2D2Q9NY47 1150 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 APOL1O14791 398 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 TBX1O43435 398 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 CAPNS1P04632 268 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 KRT8P05787 483 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 NCK1P16333 377 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 TM4SF1P30408 202 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 GARSP41250 739 aaKnown RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 SLC12A2P55011 1212 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 OSTNP61366 133 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 ECT2LQ008S8 904 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 CA9Q16790 459 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 REP15Q6BDI9 236 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 PLEKHG7Q6ZR37 379 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 SLC38A6Q8IZM9 456 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 SFRP1Q8N474 314 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 ADAMTS16Q8TE57 1224 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 RAB2BQ8WUD1 216 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 HDAC10Q969S8 669 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 DACH2Q96NX9 599 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 APOL2Q9BQE5 337 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 SPAG4Q9NPE6 437 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 RABL2AQ9UBK7 228 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 LRRIQ4A6NIV6 560 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 H0YJX3 145 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 DEAF1O75398 565 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 FYNP06241 537 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 TGM1P22735 817 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 TRIM32Q13049 653 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 DGCR6Q14129 220 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 PDK2Q15119 407 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 DOK7Q18PE1 504 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 SLC36A3Q495N2 470 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 OR6B2Q6IFH4 312 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 CYP2U1Q7Z449 544 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 OR2T34Q8NGX1 318 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 OR2T3Q8NH03 318 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 RXFP2Q8WXD0 754 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 SLC7A3Q8WY07 619 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 COQ7Q99807 217 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 SUCOQ9UBS9 1254 aaKnown RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 VPS28Q9UK41 221 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 LRFN2Q9ULH4 789 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 B3GNT3Q9Y2A9 372 aa7.53□□□□□ -1.2
CPSF6-202ENST00000435070 MAGED1Q9Y5V3 778 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 ZNF335Q9H4Z2 1342 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-202ENST00000435070 NEMP2A6NFY4 417 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 AXIN1O15169 862 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 NRP2O60462 931 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 ALBP02768 609 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 HNRNPFP52597 415 aaKnown RBP7.52□□□□□ -1.2
CPSF6-202ENST00000435070 PLK1P53350 603 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 TFAMQ00059 246 aaKnown RBP7.52□□□□□ -1.2
CPSF6-202ENST00000435070 PPP1R8Q12972 351 aaKnown RBP7.52□□□□□ -1.2
CPSF6-202ENST00000435070 FSTL4Q6MZW2 842 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 CDC42EP5Q6NZY7 148 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 TERB1Q8NA31 727 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 FBXL18Q96ME1 805 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 MTMR12Q9C0I1 747 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 WDR6Q9NNW5 1121 aaKnown RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms