RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 PAPSS1O43252 624 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 POP4O95707 220 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 RPSAP08865 295 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 CPA2P48052 419 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 FOXR2Q6PJQ5 311 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 CLEC4CQ8WTT0 213 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 KCTD15Q96SI1 283 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 ALG9Q9H6U8 611 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 VIPAS39Q9H9C1 493 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 GLOD4Q9HC38 313 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 HMGXB4Q9UGU5 601 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 VIPP01282 170 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 ADRA1DP25100 572 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 ASPAP45381 313 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 FAM187BQ17R55 369 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 KLHL35Q6PF15 583 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 PYROXD2Q8N2H3 581 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 CCDC185Q8N715 623 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 USP15Q9Y4E8 981 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 RPS24P62847 133 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 USP4Q13107 963 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 ATP6AP1LQ52LC2 224 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 MORN1Q5T089 497 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 RAVER1Q8IY67 606 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 PPP1R10Q96QC0 940 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 RRP15Q9Y3B9 282 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 CHADO15335 359 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 HOXB8P17481 243 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 HORMAD1Q86X24 394 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 HGH1Q9BTY7 390 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 PCDHGC5Q9Y5F6 944 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 NID2Q14112 1375 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 ADH5P11766 374 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 SPIRE1Q08AE8 756 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 ILF3Q12906 894 aaKnown RBP eCLIP17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 IRF5Q13568 498 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 RASIP1Q5U651 963 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 C16orf89Q6UX73 402 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 CLEC20AQ6ZU45 233 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 ARMCX6Q7L4S7 300 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 BAIAP3O94812 1187 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 CA3P07451 260 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 ALDH6A1Q02252 535 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 DLG2Q15700 870 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 LRRC73Q5JTD7 316 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 ZSCAN18Q8TBC5 510 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 PCYT2Q99447 389 aa17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 SMG9Q9H0W8 520 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-203ENST00000429416 PFKFB4Q16877 469 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 FNBP1LQ5T0N5 605 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 SLC41A1Q8IVJ1 513 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 HMCESQ96FZ2 354 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 KLHL32Q96NJ5 620 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 PCDHGC3Q9UN70 934 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 MFSD11O43934 449 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 CCDC166P0CW27 439 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 AP2B1P63010 937 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 RHBDF2Q6PJF5 856 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 HID1Q8IV36 788 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 GPR135Q8IZ08 494 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 NRSN1Q8IZ57 195 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 OR4L1Q8NH43 312 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 ZNF398Q8TD17 642 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 IRF7Q92985 503 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 GTPBP2Q9BX10 602 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 BCO2Q9BYV7 579 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 MAGEH1Q9H213 219 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 BEND7Q8N7W2 519 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 ZNF366Q8N895 744 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 FNDC5Q8NAU1 212 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 ATL1Q8WXF7 558 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 NRBF2Q96F24 287 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 FBXL18Q96ME1 805 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 THTPAQ9BU02 230 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 DPY30Q9C005 99 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 SEMA4BQ9NPR2 832 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 WARS2Q9UGM6 360 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 H0Y858 1186 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 TIMP1P01033 207 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 BGNP21810 368 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 MTHFRP42898 656 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 ACSM2AQ08AH3 577 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 LYPLAL1Q5VWZ2 237 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 ACSM2BQ68CK6 577 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 GALNT13Q8IUC8 556 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 CLEC4FQ8N1N0 589 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 NMUR1Q9HB89 426 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 NR5A2O00482 541 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 MAGEC1O60732 1142 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 VNN1O95497 513 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 PABPC1P11940 636 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 TFE3P19532 575 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 GBE1Q04446 702 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 IRF2BP1Q8IU81 584 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 NKAPQ8N5F7 415 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 EFCAB3Q8N7B9 438 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 TRIML2Q8N7C3 387 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 EBF3Q9H4W6 596 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 PCDHA11Q9Y5I1 949 aa17.23■□□□□ 0.35
SMARCA4-203ENST00000429416 DSC2Q02487 901 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms