RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 TGFAP01135 160 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 LMNAP02545 664 aaKnown RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PIM1P11309 404 aaPredicted RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CSF2RAP15509 400 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 GNAT2P19087 354 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TRIM21P19474 475 aaKnown RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 AHCYP23526 432 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CPOXP36551 454 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TAGLN2P37802 199 aaKnown RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RAB28P51157 221 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PDE1AP54750 535 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SNU13P55769 128 aaKnown RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TIRAPP58753 221 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SLFN5Q08AF3 891 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 NIPAL4Q0D2K0 466 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ABHD18Q0P651 414 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 GPM6BQ13491 265 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 THOC5Q13769 683 aaKnown RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RRS1Q15050 365 aaKnown RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ASTE1Q2TB18 679 aaPredicted RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 GLE1Q53GS7 698 aaKnown RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CRB2Q5IJ48 1285 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ZNF569Q5MCW4 686 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RBM20Q5T481 1227 aaKnown RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 UTP14CQ5TAP6 766 aaKnown RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CACHD1Q5VU97 1274 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 AADACL4Q5VUY2 407 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 HMBOX1Q6NT76 420 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 DPY19L2P1Q6NXN4 242 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 MSANTD2Q6P1R3 559 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 LRIG3Q6UXM1 1119 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SERPINA13PQ6UXR4 307 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RBM43Q6ZSC3 357 aaKnown RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SEM1Q6ZVN7 128 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 OTOP2Q7RTS6 562 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 USP37Q86T82 979 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 GAS2L3Q86XJ1 694 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 DNAJC10Q8IXB1 793 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TTLL6Q8N841 843 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 FAM133AQ8N9E0 248 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 LPCAT1Q8NF37 534 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 REPS2Q8NFH8 660 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 OR5AN1Q8NGI8 311 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ABHD5Q8WTS1 349 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CASKIN2Q8WXE0 1202 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PTERQ96BW5 349 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 HDAC11Q96DB2 347 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RNFT2Q96EX2 444 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 MAP7D2Q96T17 732 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SPATA5L1Q9BVQ7 753 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 STMN4Q9H169 189 aaPredicted RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 YY1AP1Q9H869 796 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 FBRSL1Q9HCM7 1045 aaKnown RBP5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RRP7BPQ9NSQ0 103 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 EXOC1Q9NV70 894 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TMOD3Q9NYL9 352 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RCOR1Q9UKL0 485 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 OSGIN2Q9Y236 505 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ZBTB1Q9Y2K1 713 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SLC30A1Q9Y6M5 507 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 MROH5Q6ZUA9 1318 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SALL3Q9BXA9 1300 aa5.66□□□□□ -1.5
PTP4A1P1-201ENST00000420539 OOEPA6NGQ2 149 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 A6NL46 340 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ZNF785A8K8V0 405 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 H0YIV9 168 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 QSOX1O00391 747 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 IFIT3O14879 490 aaKnown RBP5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TO15178 435 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 LIASO43766 372 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 NMT2O60551 498 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PAGE4O60829 102 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ZC3H11AO75152 810 aaKnown RBP eCLIP5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TPM1P09493 284 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 C1QTNF9P0C862 333 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CDH3P22223 829 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TCEA1P23193 301 aaKnown RBP5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 GLDCP23378 1020 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 GLRA2P23416 452 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CHRNA3P32297 505 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 GNL1P36915 607 aaPredicted RBP5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 HSD17B2P37059 387 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ANTXR2P58335 489 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 FRG1Q14331 258 aaKnown RBP5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 GAMTQ14353 236 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CCDC142Q17RM4 750 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CCDC57Q2TAC2 916 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 DPCR1Q3MIW9 517 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 AMOTQ4VCS5 1084 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 IGSF11Q5DX21 431 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 TEX35Q5T0J7 233 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 RIPPLY2Q5TAB7 128 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 DPP8Q6V1X1 898 aaPredicted RBP5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 SLC36A4Q6YBV0 504 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 C15orf39Q6ZRI6 1047 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 ATG9AQ7Z3C6 839 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 CAMKMTQ7Z624 323 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 MMP21Q8N119 569 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 KDM8Q8N371 416 aa5.65□□□□□ -1.5
PTP4A1P1-201ENST00000420539 PLD5Q8N7P1 536 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms