RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 KCNQ1P51787 676 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 CLCN4P51793 760 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 CCNHP51946 323 aaPredicted RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 YBEYP58557 167 aaPredicted RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 GAD2Q05329 585 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 RBBP5Q15291 538 aaKnown RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 ANO4Q32M45 955 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 TEX44Q53QW1 395 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 RABGAP1LQ5R372 815 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 NADSYN1Q6IA69 706 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 RFWD3Q6PCD5 774 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 AAGABQ6PD74 315 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 SLC30A9Q6PML9 568 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 RINLQ6ZS11 566 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 TMC8Q8IU68 726 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 CCNJLQ8IV13 435 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 TP53INP2Q8IXH6 220 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 MRPS31Q92665 395 aaKnown RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 FAM161BQ96MY7 647 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 RPRD1AQ96P16 312 aaPredicted RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 GCNAQ96QF7 691 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 C17orf80Q9BSJ5 609 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 LRRC3Q9BY71 257 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 SLC39A8Q9C0K1 460 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 ZNF334Q9HCZ1 680 aaPredicted RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 FBXO6Q9NRD1 293 aaPredicted RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 THAP1Q9NVV9 213 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 NDE1Q9NXR1 346 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 IL1RAPL1Q9NZN1 696 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 KLHL8Q9P2G9 620 aaPredicted RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 DPP7Q9UHL4 492 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 STOML2Q9UJZ1 356 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 DPPA5A6NC42 116 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 C2orf78A6NCI8 922 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 SOBPA7XYQ1 873 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 DFFAO00273 331 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 MATN3O15232 486 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 PSMD3O43242 534 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 MAFKO60675 156 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 KRT36O76013 467 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 TM7SF2O76062 418 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 POU2F2P09086 479 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 MYL4P12829 197 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 PEX19P40855 299 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 MAGEA3P43357 314 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 ERVK-21P61565 698 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 STX3Q13277 289 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 THOC5Q13769 683 aaKnown RBP11.73□□□□□ -0.53
RFFL-205ENST00000415395 PARP15Q460N3 678 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 PPM1LQ5SGD2 360 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 ELMSAN1Q6PJG2 1045 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 TIFABQ6ZNK6 161 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 CYS1Q717R9 158 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 PID1Q7Z2X4 250 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 MFN1Q8IWA4 741 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 CCDC33Q8N5R6 958 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 LEMD2Q8NC56 503 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 CDKL2Q92772 493 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 FAM136AQ96C01 138 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 CELF6Q96J87 481 aaKnown RBP11.73□□□□□ -0.53
RFFL-205ENST00000415395 TEKT5Q96M29 485 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 RILPQ96NA2 401 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 RNF38Q9H0F5 515 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 GBA3Q9H227 469 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 MPP6Q9NZW5 540 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 SEPT10Q9P0V9 454 aa11.73□□□□□ -0.53
RFFL-205ENST00000415395 FAM237BA0A1B0GVD1 139 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 HIDE1A8MVS5 230 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 CAPN14A8MX76 684 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 KCNK1O00180 336 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 CACNG3O60359 315 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 HNRNPA1P09651 372 aaKnown RBP eCLIP11.72□□□□□ -0.53
RFFL-205ENST00000415395 SPATA31D3P0C874 917 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 MBL2P11226 248 aaPredicted RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 SP100P23497 879 aaPredicted RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 DNAJB1P25685 340 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 DDX6P26196 483 aaKnown RBP eCLIP11.72□□□□□ -0.53
RFFL-205ENST00000415395 GABRR2P28476 465 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 CORO1AP31146 461 aaKnown RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 EPHA5P54756 1037 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 SLC7A9P82251 487 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 XIAPP98170 497 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 BST1Q10588 318 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 CHI3L2Q15782 390 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 ADGRF1Q5T601 910 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 NAIF1Q69YI7 327 aaPredicted RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 SPATA31D4Q6ZUB0 917 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 CHST9Q7L1S5 443 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 ADGRG6Q86SQ4 1221 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 ARID3BQ8IVW6 561 aaPredicted RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 KLHDC8BQ8IXV7 354 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 TAB3Q8N5C8 712 aaPredicted RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 ZSCAN18Q8TBC5 510 aaPredicted RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 PPP4R1Q8TF05 950 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 ZNF483Q8TF39 744 aaPredicted RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 LRRN4Q8WUT4 740 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 DEPDC1BQ8WUY9 529 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 ZFAND2BQ8WV99 257 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 SREK1Q8WXA9 508 aaKnown RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 JADE3Q92613 823 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms