RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 OR6C76A6NM76 312 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 C17orf100A8MU93 164 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 QSOX1O00391 747 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 DNM1LO00429 736 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 PLOD2O00469 737 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 ZNF263O14978 683 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 PLSCR1O15162 318 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 CA12O43570 354 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 SPRY2O43597 315 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 MITFO75030 526 aaPredicted RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 AVILO75366 819 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 NDUFS3O75489 264 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 STAM2O75886 525 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 TPPPO94811 219 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 GPANK1O95872 356 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 SRPRAP08240 638 aaKnown RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 SUPT20HL2P0C7V6 817 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 PKMP14618 531 aaKnown RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 TMEM11P17152 192 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 TRIM21P19474 475 aaKnown RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 CD72P21854 359 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 PON1P27169 355 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 POU1F1P28069 291 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 MCM5P33992 734 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 GABRB2P47870 512 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 PIP4K2AP48426 406 aaPredicted RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 CCR3P51677 355 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 F2RL1P55085 397 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 B4GALNT1Q00973 533 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 CYP4A11Q02928 519 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 TAP1Q03518 808 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 FPGSQ05932 587 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 IKQ13123 557 aaPredicted RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 TUBB2AQ13885 445 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 LASP1Q14847 261 aaKnown RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 MEP1BQ16820 701 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 SUPT20HL1Q3ZLR7 823 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 CD300EQ496F6 205 aaPredicted RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 ZRANB3Q5FWF4 1079 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 WDR73Q6P4I2 378 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 LINC00696Q6ZRV3 163 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 LURAP1LQ8IV03 231 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 SIX6OS1Q8N1H7 587 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 SRFBP1Q8NEF9 429 aaKnown RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 CTCFLQ8NI51 663 aaPredicted RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 SPATA20Q8TB22 786 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 CENPTQ96BT3 561 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 PPP1R13BQ96KQ4 1090 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 OR14A2Q96R54 314 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 H2AFJQ9BTM1 129 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 TUBB2BQ9BVA1 445 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 GLIS2Q9BZE0 524 aaPredicted RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 C12orf65Q9H3J6 166 aaKnown RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 HRH4Q9H3N8 390 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 GLOD4Q9HC38 313 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 IL1RAPL2Q9NP60 686 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 INTS10Q9NVR2 710 aaKnown RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 BABAM1Q9NWV8 329 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 AKAP7Q9P0M2 348 aaPredicted RBP5.09□□□□□ -1.59
LSM5-205ENST00000409952 RNF181Q9P0P0 153 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 ABI3Q9P2A4 366 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 LOC102723996A0A087X1L8 192 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 LRRD1A4D1F6 860 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 KRT87PA6NCN2 255 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 NDC80O14777 642 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 PPM1DO15297 605 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 HCRTR2O43614 444 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 MFAP3LO75121 409 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 GUCA1CO95843 209 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 OLFM2O95897 454 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 IRF1P10914 325 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 KRT10P13645 584 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 CREB1P16220 341 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 CASTP20810 708 aaKnown RBP5.08□□□□□ -1.6
LSM5-205ENST00000409952 ACO1P21399 889 aaKnown RBP5.08□□□□□ -1.6
LSM5-205ENST00000409952 MC5RP33032 325 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 RFC1P35251 1148 aaPredicted RBP5.08□□□□□ -1.6
LSM5-205ENST00000409952 MTHFRP42898 656 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 GNAQP50148 359 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 BLKP51451 505 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 BMXP51813 675 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 TXNL4AP83876 142 aaKnown RBP5.08□□□□□ -1.6
LSM5-205ENST00000409952 NHLH2Q02577 135 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 RPA4Q13156 261 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 CBX3Q13185 183 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 GRM7Q14831 915 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 PRKD1Q15139 912 aaPredicted RBP5.08□□□□□ -1.6
LSM5-205ENST00000409952 LETM2Q2VYF4 491 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 SERTAD4-AS1Q5TG53 156 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 SLC39A5Q6ZMH5 540 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 FAM160B2Q86V87 743 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 FAM217AQ8IXS0 508 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 MMP21Q8N119 569 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 PI4KAP1Q8N8J0 262 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 TC2NQ8N9U0 490 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 ADPRHL1Q8NDY3 354 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 SETD9Q8NE22 299 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 MCUQ8NE86 351 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 MDGA1Q8NFP4 955 aa5.08□□□□□ -1.6
LSM5-205ENST00000409952 C2CD4CQ8TF44 421 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms