RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TAF2Q6P1X5 1199 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 STX12Q86Y82 276 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 REXO1L1PQ8IX06 675 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 CLCC1Q96S66 551 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 CCT8L2Q96SF2 557 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 DNAJC28Q9NX36 388 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 HYKKA2RU49 373 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 CPSF4LA6NMK7 179 aaKnown RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 F8VP50 259 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 ZNF208O43345 1280 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 MANFP55145 182 aaKnown RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 ADGRA1Q86SQ6 560 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 STK32CQ86UX6 486 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 RTL3Q8N8U3 475 aaKnown RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 BTBD7Q9P203 1132 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 PACSIN3Q9UKS6 424 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 NDUFAF1Q9Y375 327 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 MED14O60244 1454 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 FAM92AA1XBS5 289 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 CXCL11O14625 94 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 TRIM24O15164 1050 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 MAGEB3O15480 346 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 MSCO60682 206 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 ZSCAN5DPP0CG00 497 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 AQP1P29972 269 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 KCNMA1Q12791 1236 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 FSTL1Q12841 308 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 CPSF6Q16630 551 aaKnown RBP eCLIP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 NRF1Q16656 503 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 FAM98BQ52LJ0 330 aaKnown RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 FAM46CQ5VWP2 391 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 DEFB107AQ8IZN7 70 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 HERVK_113Q902F9 699 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 AARSD1Q9BTE6 412 aaKnown RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 RTFDC1Q9BY42 306 aaPredicted RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 FAM192AQ9GZU8 254 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 CAB39LQ9H9S4 337 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 NCKIPSDQ9NZQ3 722 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 A0A1W2PQH9 124 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 URADA6NGE7 173 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 WTIPA6NIX2 430 aaPredicted RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 FAM228BP0C875 321 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 GMFBP60983 142 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 VITQ6UXI7 678 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 DLK2Q6UY11 383 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 SV2AQ7L0J3 742 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 MTDHQ86UE4 582 aaKnown RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 OR56A4Q8NGH8 313 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 HTR3CQ8WXA8 447 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 KAT5Q92993 513 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 TRMT13Q9NUP7 481 aaKnown RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 ADPRHL2Q9NX46 363 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 DLGAP2Q9P1A6 1054 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 A0A1W2PQC6 194 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 PEX11AO75192 247 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 CCDC166P0CW27 439 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 CYP4B1P13584 511 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 LSM3P62310 102 aaKnown RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 NRG1Q02297 640 aaPredicted RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 SLC22A9Q8IVM8 553 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 OR5T3Q8NGG3 340 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 DNASE1L2Q92874 299 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 NOX1Q9Y5S8 564 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 NRCAMQ92823 1304 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 H3BMM5 538 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 RBP1P09455 135 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 MYBL2P10244 700 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 AHCYP23526 432 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 PIK3R1P27986 724 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 IL12BP29460 328 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 IFNGR2P38484 337 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 PCDH1Q08174 1060 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 ACSM2AQ08AH3 577 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 RASA2Q15283 850 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 MLIPQ5VWP3 458 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 ACSM2BQ68CK6 577 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 CHST9Q7L1S5 443 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 OR52K2Q8NGK3 314 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 FAM81AQ8TBF8 368 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 SHC3Q92529 594 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 VPS33AQ96AX1 596 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 TLR5O60602 858 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 OR7A10O76100 309 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 LINC00032P0C843 101 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ZNF8P17098 575 aaPredicted RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 SREBF1P36956 1147 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ARCN1P48444 511 aaKnown RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 PCBP2Q15366 365 aaKnown RBP eCLIP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 RFWD3Q6PCD5 774 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 KCNT2Q6UVM3 1135 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 GINS4Q9BRT9 223 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 POPDC2Q9HBU9 364 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 C3orf18Q9UK00 162 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 FBXW2Q9UKT8 454 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 RGS20O76081 388 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 KCNH1O95259 989 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 OMPP47874 163 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 SLC7A2P52569 658 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 CAPZA1P52907 286 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms