RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SHC3Q92529 594 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 KAT5Q92993 513 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 FAM131CQ96AQ9 280 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 GDAP1L1Q96MZ0 367 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 MIS12Q9H081 205 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 GOLPH3Q9H4A6 298 aa13□□□□□ -0.33
CHRNA1-205ENST00000409542 TDRD6O60522 2096 aaKnown RBP13□□□□□ -0.33
CHRNA1-205ENST00000409542 ERICH4A6NGS2 130 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 MTA2O94776 668 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 ADH1BP00325 375 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 GIMD1P0DJR0 217 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 GZMAP12544 262 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 BRD2P25440 801 aaKnown RBP12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 PPP2R5EQ16537 467 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 SLC45A4Q5BKX6 768 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 SYPL2Q5VXT5 272 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 RAP1GAP2Q684P5 730 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 PRPF39Q86UA1 669 aaKnown RBP12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 TAC4Q86UU9 113 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 OXR1Q8N573 874 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 ZNF557Q8N988 423 aaPredicted RBP12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 TSEN2Q8NCE0 465 aaKnown RBP12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 FRS2Q8WU20 508 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 SLC20A1Q8WUM9 679 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 ARHGEF26Q96DR7 871 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 FAM81BQ96LP2 452 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 NAP1L3Q99457 506 aaPredicted RBP12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 THAP2Q9H0W7 228 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 CARD9Q9H257 536 aa12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 NOCTQ9UK39 431 aaKnown RBP12.99□□□□□ -0.33
CHRNA1-205ENST00000409542 MIF4GDA9UHW6 222 aaKnown RBP12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 J3QKU1 62 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 M0QYV0 167 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 KRIT1O00522 736 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 PLRG1O43660 514 aaKnown RBP12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 MPOP05164 745 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 KRT10P13645 584 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 HSPA9P38646 679 aaKnown RBP12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 PITX1P78337 314 aaPredicted RBP12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 ARHGAP40Q5TG30 622 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 CDCP2Q5VXM1 449 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 TMEM270Q6UE05 265 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 CIR1Q86X95 450 aaPredicted RBP12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 KLHL7Q8IXQ5 586 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 KLK6Q92876 244 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 HIC2Q96JB3 615 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 KREMEN1Q96MU8 473 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 RUFY1Q96T51 708 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 LGMNQ99538 433 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 MYOCQ99972 504 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 SEPT11Q9NVA2 429 aaKnown RBP12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 TAS2R14Q9NYV8 317 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 NFU1Q9UMS0 254 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 TLR6Q9Y2C9 796 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 CEP83Q9Y592 693 aa12.98□□□□□ -0.33
CHRNA1-205ENST00000409542 TYW5A2RUC4 315 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 ERVH48-1M5A8F1 160 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 RNF103O00237 685 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 SART1O43290 800 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 FTLP02792 175 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 PDGFRAP16234 1089 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 CHRNB2P17787 502 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 TACR2P21452 398 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 DGKAP23743 735 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 TAS2R38P59533 333 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 RNASE9P60153 205 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 CNTN1Q12860 1018 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 ZNF211Q13398 564 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 LY6DQ14210 128 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 CNGA2Q16280 664 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 TAF1BQ53T94 588 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 ZC3H12AQ5D1E8 599 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 AGBL4Q5VU57 503 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 ENOSF1Q7L5Y1 443 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 C1orf131Q8NDD1 294 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 OR52K2Q8NGK3 314 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 FAM76AQ8TAV0 307 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 EPS8L1Q8TE68 723 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 IFT81Q8WYA0 676 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 SEC14L1Q92503 715 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 NT5C1BQ96P26 610 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 DDX50Q9BQ39 737 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 KIAA1257Q9ULG3 409 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 LY6G6EA0A0G2JKS1 128 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 A0A1B0GVM2 712 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 GOLGA6CA6NDK9 693 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 ZSCAN5CA6NGD5 496 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 FFAR2O15552 330 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 SHOX2O60902 331 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 GOLGA6DP0CG33 693 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 E2F1Q01094 437 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 ELAVL3Q14576 367 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 STAT4Q14765 748 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 CFAP58Q5T655 872 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 RNF219Q5W0B1 726 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 LEKR1Q6ZMV7 388 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 MAATS1Q7Z4T9 603 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 NOP9Q86U38 636 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 IQCHQ86VS3 1027 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 TRIM69Q86WT6 500 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms