RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 SLC38A8A6NNN8 435 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 MSI1O43347 362 aaKnown RBP4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 HNRNPRO43390 633 aaKnown RBP4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 AVILO75366 819 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 RPP40O75818 363 aaKnown RBP4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 CXCL14O95715 111 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 FCGR1AP12314 374 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 PCSK2P16519 638 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 CTNNB1P35222 781 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 CXCR3P49682 368 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 CCNG1P51959 295 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 NAGLUP54802 743 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 GNA12Q03113 381 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 CA9Q16790 459 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 AGKQ53H12 422 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 ADAMTSL2Q86TH1 951 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 SAPCD2Q86UD0 394 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 CPNE8Q86YQ8 564 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC41A1Q8IVJ1 513 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 OR4L1Q8NH43 312 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 STYXQ8WUJ0 223 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 NDRG1Q92597 394 aaKnown RBP4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 EME1Q96AY2 570 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 PPP1R16AQ96I34 528 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 TCF12Q99081 682 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 TEX12Q9BXU0 123 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 SMOC2Q9H3U7 446 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 POMKQ9H5K3 350 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 ACTR8Q9H981 624 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 AGO3Q9H9G7 860 aaKnown RBP4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 MID1IP1Q9NPA3 183 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 AURKCQ9UQB9 309 aa4.79□□□□□ -1.64
PCDH11X-207ENST00000406881 TAF1P21675 1872 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 NRP1O14786 923 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 CD3EAPO15446 510 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC7A4O43246 635 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 C2P06681 752 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 SERPINA6P08185 405 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 CCDC166P0CW27 439 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 FMO4P31512 558 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 AP1S1P61966 158 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 KLF1Q13351 362 aaPredicted RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 PTK2BQ14289 1009 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 RCN1Q15293 331 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 LACTB2Q53H82 288 aaPredicted RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 CERCAMQ5T4B2 595 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 METTL21CQ5VZV1 264 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 NCBP2-AS2Q69YL0 99 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 GRAMD4Q6IC98 578 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 KIAA0930Q6ICG6 404 aaPredicted RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 ZFP1Q6P2D0 407 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 RNF168Q8IYW5 571 aaPredicted RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 PYROXD2Q8N2H3 581 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 FBXO22Q8NEZ5 403 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 ATL1Q8WXF7 558 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 STARD8Q92502 1023 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 CASP10Q92851 521 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 TMEM159Q96B96 161 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 TIFAQ96CG3 184 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 PHF21BQ96EK2 531 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 MS4A4AQ96JQ5 239 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 CNDP1Q96KN2 507 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 ECSITQ9BQ95 431 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 HTATIP2Q9BUP3 242 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 OSBPL1AQ9BXW6 950 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 SHCBP1LQ9BZQ2 653 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 ELOVL6Q9H5J4 265 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 FBXO6Q9NRD1 293 aaPredicted RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 UTP6Q9NYH9 597 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 CROTQ9UKG9 612 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 GNEQ9Y223 722 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 PCDHB1Q9Y5F3 818 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 C16orf96A6NNT2 1141 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 NT5C1B-RDH14C9J2C7 533 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 BTN3A1O00481 513 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 AKAP10O43572 662 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 SYNCRIPO60506 623 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 MAGEC1O60732 1142 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 DGKIO75912 1065 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 TMEM63AO94886 807 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 ATP6V1G2O95670 118 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 CATP04040 527 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 RPN2P04844 631 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 LBPP18428 481 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 TFEBP19484 476 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 DNAJB1P25685 340 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 PSMA4P25789 261 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 GABRR2P28476 465 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 CORO1AP31146 461 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 GJA5P36382 358 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 ANXA11P50995 505 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 MLLT6P55198 1093 aaPredicted RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 TBL3Q12788 808 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 GPR17Q13304 367 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 NFYCQ13952 458 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 FRG1Q14331 258 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 KCNJ11Q14654 390 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 LPIN1Q14693 890 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 STARD3Q14849 445 aa4.78□□□□□ -1.64
PCDH11X-207ENST00000406881 KPNB1Q14974 876 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms