RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 TMEM216Q9P0N5 145 aa12.4□□□□□ -0.42
CLIP4-203ENST00000401617 GGT7Q9UJ14 662 aa12.4□□□□□ -0.42
CLIP4-203ENST00000401617 SSX2IPQ9Y2D8 614 aa12.4□□□□□ -0.42
CLIP4-203ENST00000401617 CAPN7Q9Y6W3 813 aa12.4□□□□□ -0.42
CLIP4-203ENST00000401617 ANKRD36A6QL64 1941 aa12.4□□□□□ -0.42
CLIP4-203ENST00000401617 TTC24A2A3L6 582 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-203ENST00000401617 CCDC78A2IDD5 438 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 GOLGA8TH3BQL2 631 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 C2P06681 752 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 F7P08709 466 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-203ENST00000401617 NEFHP12036 1026 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 DNAJB1P25685 340 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 ETFBP38117 255 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 ZNF235Q14590 738 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 GRM3Q14832 879 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 CCDC153Q494R4 210 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 FASTKD1Q53R41 847 aaKnown RBP12.39□□□□□ -0.43
CLIP4-203ENST00000401617 MBLAC2Q68D91 279 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 CXorf57Q6NSI4 855 aaKnown RBP12.39□□□□□ -0.43
CLIP4-203ENST00000401617 ZNF783Q6ZMS7 281 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 Q6ZNB5 142 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 KIAA0408Q6ZU52 694 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 KDELC2Q7Z4H8 507 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 HERC6Q8IVU3 1022 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 FAM217AQ8IXS0 508 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 PLD6Q8N2A8 252 aaKnown RBP12.39□□□□□ -0.43
CLIP4-203ENST00000401617 OR6Y1Q8NGX8 325 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 RFWD2Q8NHY2 731 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 THOC1Q96FV9 657 aaKnown RBP12.39□□□□□ -0.43
CLIP4-203ENST00000401617 LRRC3Q9BY71 257 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 SEPT3Q9UH03 358 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 A0A096LPK6 155 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-203ENST00000401617 DCTN3O75935 186 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 RHOCP08134 193 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 CNPP09543 421 aaKnown RBP12.39□□□□□ -0.43
CLIP4-203ENST00000401617 FGF3P11487 239 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-203ENST00000401617 CR2P20023 1033 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 HLA-DPA1P20036 260 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 TMPRSS15P98073 1019 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 OVGP1Q12889 678 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 ZNF177Q13360 481 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-203ENST00000401617 PCLAFQ15004 111 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 NLRP9Q7RTR0 991 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 OTOP2Q7RTS6 562 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 GALNT7Q86SF2 657 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 LCA5Q86VQ0 697 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 DENND6AQ8IWF6 608 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 OR13J1Q8NGT2 312 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 PEX13Q92968 403 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 TRIB3Q96RU7 358 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 SLC22A12Q96S37 553 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 FAM167BQ9BTA0 163 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 UBA2Q9UBT2 640 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-203ENST00000401617 ANKRD6Q9Y2G4 727 aa12.39□□□□□ -0.43
CLIP4-203ENST00000401617 TGM5O43548 720 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 GJB3O75712 270 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 FGF1P05230 155 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 MBL2P11226 248 aaPredicted RBP12.38□□□□□ -0.43
CLIP4-203ENST00000401617 SKIV2L2P42285 1042 aaKnown RBP12.38□□□□□ -0.43
CLIP4-203ENST00000401617 ABCG1P45844 678 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 OXCT1P55809 520 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 NCALDP61601 193 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 SMAD3P84022 425 aaKnown RBP12.38□□□□□ -0.43
CLIP4-203ENST00000401617 ACVR1Q04771 509 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 DLG2Q15700 870 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 IL31Q6EBC2 164 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 NEPROQ6NW34 567 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 MICALL1Q8N3F8 863 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 BBS5Q8N3I7 341 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 ATXN7L3BQ96GX2 97 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 NSMCE3Q96MG7 304 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 LRRC37BQ96QE4 947 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 CYP2S1Q96SQ9 504 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 C1QTNF1Q9BXJ1 281 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 MYLK2Q9H1R3 596 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 CAB39LQ9H9S4 337 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 THAP1Q9NVV9 213 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.38□□□□□ -0.43
CLIP4-203ENST00000401617 COPG2Q9UBF2 871 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 FBXO5Q9UKT4 447 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 RIMKLBQ9ULI2 386 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 ALPK3Q96L96 1907 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 DOCK6Q96HP0 2047 aa12.38□□□□□ -0.43
CLIP4-203ENST00000401617 SLC7A4O43246 635 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 LDB2O43679 373 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 SERPINF2P08697 491 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 IRF1P10914 325 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 HSPA8P11142 646 aaKnown RBP12.37□□□□□ -0.43
CLIP4-203ENST00000401617 GLDCP23378 1020 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 GMPRP36959 345 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 SLC1A2P43004 574 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 ZXDBP98169 803 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 MPP1Q00013 466 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 STX3Q13277 289 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 CTBP1Q13363 440 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 THOC5Q13769 683 aaKnown RBP12.37□□□□□ -0.43
CLIP4-203ENST00000401617 SEPT6Q14141 434 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 GAREM2Q75VX8 874 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 TMC8Q8IU68 726 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms