RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 LRCH1Q9Y2L9 728 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 CNTNAP2Q9UHC6 1331 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 PARP4Q9UKK3 1724 aaKnown RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 C2orf72A6NCS6 295 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 RGS10O43665 173 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 SKAP2O75563 359 aaPredicted RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 SUPT7LO94864 414 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 VDRP11473 427 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 FOSL2P15408 326 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 RPL4P36578 427 aaKnown RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 NDUFA8P51970 172 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 RHBDL3P58872 404 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 STXBP1P61764 594 aaKnown RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 CSNK2BP67870 215 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 HECTD2Q5U5R9 776 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 TMC3Q7Z5M5 1100 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 RFFLQ8WZ73 363 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 TEKT5Q96M29 485 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 APOL4Q9BPW4 351 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 ASB7Q9H672 318 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 ATP13A1Q9HD20 1204 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 OPTCQ9UBM4 332 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 CD163L1Q9NR16 1453 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 CDH16O75309 829 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 HOXB9P17482 250 aaPredicted RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 PTPRAP18433 802 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 CLCN7P51798 805 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 CAMK2DQ13557 499 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 OTUD3Q5T2D3 398 aaPredicted RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 C16orf86Q6ZW13 317 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 NLRP14Q86W24 1093 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 ARHGAP12Q8IWW6 846 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 GPALPP1Q8IXQ4 340 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 MAGEE2Q8TD90 523 aaPredicted RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 TRPC4APQ8TEL6 797 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 DLG3Q92796 817 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 TCEAL3Q969E4 200 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 RAB11FIP5Q9BXF6 653 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 TMEM39BQ9GZU3 492 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 GJE1A6NN92 205 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 ENDOD1O94919 500 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 HSDL1Q3SXM5 330 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 GPAT3Q53EU6 434 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 ABHD13Q7L211 337 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 SLC25A41Q8N5S1 370 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 NACC2Q96BF6 587 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 RAB39BQ96DA2 213 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 CCT8L2Q96SF2 557 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 BPIFA3Q9BQP9 254 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 TRMT61BQ9BVS5 477 aaKnown RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 EXOSC4Q9NPD3 245 aaKnown RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.06□□□□□ -1.6
TTC3-204ENST00000399017 ADPRHL2Q9NX46 363 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 KLK14Q9P0G3 267 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 SLC9A8Q9Y2E8 581 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 KIAA1217Q5T5P2 1943 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 CHD2O14647 1828 aaKnown RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 CEP170BQ9Y4F5 1589 aaPredicted RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 SMCO3A2RU48 225 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 TMEM150CB9EJG8 249 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 EOMESO95936 686 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 VTNP04004 478 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 CDH3P22223 829 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 CRABP2P29373 138 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 SLC1A2P43004 574 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 DNASE1L1P49184 302 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 GFPT1Q06210 699 aaPredicted RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 MAD2L1BPQ15013 274 aaPredicted RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 CWF19L1Q69YN2 538 aaKnown RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 FAM92BQ6ZTR7 304 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 OR10Q1Q8NGQ4 319 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 PCDHAC2Q9Y5I4 1007 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 GLI2P10070 1586 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 SALL1Q9NSC2 1324 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 RAD51CO43502 376 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 LSM8O95777 96 aaKnown RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 HNRNPCP07910 306 aaKnown RBP eCLIP5.06□□□□□ -1.6
TTC3-204ENST00000399017 CYP2D6P10635 497 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 MTHFRP42898 656 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 GRM4Q14833 912 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 ZKSCAN8Q15776 578 aaPredicted RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 SLC9B1Q4ZJI4 515 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 PCNX4Q63HM2 1172 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 TPGS1Q6ZTW0 290 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 KIAA2013Q8IYS2 634 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 GMCL1P1Q8NEA9 526 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 DNAJB3Q8WWF6 145 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 ATOH1Q92858 354 aaPredicted RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 CAPNS2Q96L46 248 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 UGT2B28Q9BY64 529 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 PTGES2Q9H7Z7 377 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 PSMC3IPQ9P2W1 217 aaPredicted RBP5.06□□□□□ -1.6
TTC3-204ENST00000399017 PSMD13Q9UNM6 376 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 MTMR6Q9Y217 621 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 PCDHGA2Q9Y5H1 932 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 ADGRB3O60242 1522 aa5.06□□□□□ -1.6
TTC3-204ENST00000399017 APOC1P02654 83 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ZCCHC18P0CG32 403 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 RARAP10276 462 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 PTPN2P17706 415 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms