RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 GSTM1P09488 218 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 LTA4HP09960 611 aaKnown RBP10.86□□□□□ -0.67
CCDC40-204ENST00000397545 PEX2P28328 305 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 ALDH7A1P49419 539 aaKnown RBP10.86□□□□□ -0.67
CCDC40-204ENST00000397545 NEK3P51956 506 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 VGLL4Q14135 290 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 GSTA3Q16772 222 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 ABHD15Q6UXT9 468 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 XYLT1Q86Y38 959 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 PYROXD2Q8N2H3 581 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 CSPG4P5Q96PW8 444 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 EBF4Q9BQW3 602 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 ABCG8Q9H221 673 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 RMND5AQ9H871 391 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 ZFP14Q9HCL3 533 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 S100A14Q9HCY8 104 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 ARHGAP28Q9P2N2 729 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 ANKRD6Q9Y2G4 727 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 MYH11P35749 1972 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 BIRC5O15392 142 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 ARIH2O95376 493 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 ZBTB11O95625 1053 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-204ENST00000397545 CYP1A1P04798 512 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-204ENST00000397545 F7P08709 466 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-204ENST00000397545 VCLP18206 1134 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 DNAJB2P25686 324 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 PRKAA2P54646 552 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 NR1H2P55055 460 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 PMF1Q6P1K2 205 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 ZNF621Q6ZSS3 439 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 GLT6D1Q7Z4J2 308 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 LGI2Q8N0V4 545 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 DCBLD1Q8N8Z6 715 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 KLHL5Q96PQ7 755 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 SH3GL1Q99961 368 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 NOL11Q9H8H0 719 aaKnown RBP10.86□□□□□ -0.67
CCDC40-204ENST00000397545 XPNPEP1Q9NQW7 623 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 ARHGEF3Q9NR81 526 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 MPP6Q9NZW5 540 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 H2AFY2Q9P0M6 372 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-204ENST00000397545 KLQ9UEF7 1012 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 C5orf60A6NFR6 353 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 LZTS3O60299 673 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-204ENST00000397545 FAM20BO75063 409 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 MFN2O95140 757 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 UQCRBP14927 111 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 ATXN1P54253 815 aaKnown RBP10.86□□□□□ -0.67
CCDC40-204ENST00000397545 GAD2Q05329 585 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 SLC39A12Q504Y0 691 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 SCARA3Q6AZY7 606 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 STX19Q8N4C7 294 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 C1orf127Q8N9H9 656 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 OR56A4Q8NGH8 313 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 RP9Q8TA86 221 aaKnown RBP10.86□□□□□ -0.67
CCDC40-204ENST00000397545 HDAC10Q969S8 669 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 SPAG4Q9NPE6 437 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 TMEM216Q9P0N5 145 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 PGAP2Q9UHJ9 254 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 LGALS13Q9UHV8 139 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 CCL22O00626 93 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 TRIM38O00635 465 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 ADCY6O43306 1168 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 TBX10O75333 385 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 ATP5BP06576 529 aaKnown RBP10.85□□□□□ -0.67
CCDC40-204ENST00000397545 TSHRP16473 764 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 MATKP42679 507 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 GALK1P51570 392 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 RAB10P61026 200 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 MSLNQ13421 630 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-204ENST00000397545 DLG2Q15700 870 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 ARL13AQ5H913 290 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-204ENST00000397545 LIPMQ5VYY2 423 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 LDB1Q86U70 411 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-204ENST00000397545 FAM228AQ86W67 206 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 UNC93AQ86WB7 457 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 GPSM1Q86YR5 675 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 EID3Q8N140 333 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 LPPQ93052 612 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 ADGRE3Q9BY15 652 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 CDH19Q9H159 772 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 NXF3Q9H4D5 531 aaKnown RBP10.85□□□□□ -0.67
CCDC40-204ENST00000397545 ZNF358Q9NW07 568 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 SLC17A6Q9P2U8 582 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 CDV3Q9UKY7 258 aaKnown RBP10.85□□□□□ -0.67
CCDC40-204ENST00000397545 RPL26L1Q9UNX3 145 aaKnown RBP10.85□□□□□ -0.67
CCDC40-204ENST00000397545 COL2A1P02458 1487 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-204ENST00000397545 LOC100506127A0A0U1RQW1 187 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 SMIM31A0A1B0GVY4 71 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 TCRBV7S3A2A0A539 114 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 FAM149AA5PLN7 773 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 CNOT3O75175 753 aaKnown RBP10.85□□□□□ -0.67
CCDC40-204ENST00000397545 CABYRO75952 493 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 TOMM70O94826 608 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 KRT6AP02538 564 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 KRT6BP04259 564 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 LINC00032P0C843 101 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 GPC1P35052 558 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 KRT6CP48668 564 aa10.85□□□□□ -0.67
CCDC40-204ENST00000397545 IDH2P48735 452 aaKnown RBP10.85□□□□□ -0.67
CCDC40-204ENST00000397545 RAP1GDS1P52306 607 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms