RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 C8AP07357 584 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 ECHS1P30084 290 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 GSSP48637 474 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 MAP3K10Q02779 954 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 C4orf22Q6V702 233 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 NPAS4Q8IUM7 802 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 FBXO39Q8N4B4 442 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 LZTR1Q8N653 840 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 TEX9Q8N6V9 391 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 KLK6Q92876 244 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 SMAD5Q99717 465 aaKnown RBP11.28□□□□□ -0.6
IFT140-202ENST00000397417 FRMD8P1Q9BZ68 369 aaPredicted RBP11.28□□□□□ -0.6
IFT140-202ENST00000397417 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 ZFP14Q9HCL3 533 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 ANGPTL2Q9UKU9 493 aa11.28□□□□□ -0.6
IFT140-202ENST00000397417 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.28□□□□□ -0.6
IFT140-202ENST00000397417 ATXN2Q99700 1313 aaKnown RBP11.28□□□□□ -0.6
IFT140-202ENST00000397417 LAMB1P07942 1786 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 EME2A4GXA9 379 aaPredicted RBP11.27□□□□□ -0.6
IFT140-202ENST00000397417 PTGESO14684 152 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 SNX3O60493 162 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 SYNCRIPO60506 623 aaKnown RBP11.27□□□□□ -0.6
IFT140-202ENST00000397417 MTX2O75431 263 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 DRG2P55039 364 aaKnown RBP11.27□□□□□ -0.6
IFT140-202ENST00000397417 ANKRD20A4Q4UJ75 823 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 PDPK2PQ6A1A2 396 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 PACS1Q6VY07 963 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 RPS27LQ71UM5 84 aaKnown RBP11.27□□□□□ -0.6
IFT140-202ENST00000397417 OR10T2Q8NGX3 314 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 METTL6Q8TCB7 284 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 EME1Q96AY2 570 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 ACE2Q9BYF1 805 aaPredicted RBP11.27□□□□□ -0.6
IFT140-202ENST00000397417 IL22Q9GZX6 179 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 CXorf56Q9H5V9 222 aa11.27□□□□□ -0.6
IFT140-202ENST00000397417 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.6
IFT140-202ENST00000397417 DNAJC25-GNG10A0A024R161 153 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 AP3B1O00203 1094 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 DNM1LO00429 736 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 ZSCAN9O15535 394 aaPredicted RBP11.27□□□□□ -0.61
IFT140-202ENST00000397417 NUDT17P0C025 328 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 ZCCHC18P0CG32 403 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 PCNAP12004 261 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 KPNA1P52294 538 aaPredicted RBP11.27□□□□□ -0.61
IFT140-202ENST00000397417 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 SNX32Q86XE0 403 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 MYO1HQ8N1T3 1032 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 TRIML2Q8N7C3 387 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 ZNF333Q96JL9 665 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 C1orf50Q9BV19 199 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 TLE6Q9H808 572 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 SLC28A3Q9HAS3 691 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 TAS2R13Q9NYV9 303 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 SCN7AQ01118 1682 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 KCNU1A8MYU2 1149 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 SOCS7O14512 581 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 ATP5HO75947 161 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 CPSF4O95639 269 aaKnown RBP11.27□□□□□ -0.61
IFT140-202ENST00000397417 FGBP02675 491 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 ATP6V1B1P15313 513 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 TACR2P21452 398 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 PTPN3P26045 913 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 AP2B1P63010 937 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 FLOT2Q14254 428 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 ZDHHC14Q8IZN3 488 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 C12orf76Q8N812 135 aaPredicted RBP11.27□□□□□ -0.61
IFT140-202ENST00000397417 PTGR2Q8N8N7 351 aaPredicted RBP11.27□□□□□ -0.61
IFT140-202ENST00000397417 CDYL2Q8N8U2 506 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 C3orf58Q8NDZ4 430 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 NKD2Q969F2 451 aaPredicted RBP11.27□□□□□ -0.61
IFT140-202ENST00000397417 SEPHS2Q99611 448 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 ARHGAP26Q9UNA1 814 aa11.27□□□□□ -0.61
IFT140-202ENST00000397417 POLR2EP19388 210 aaKnown RBP11.26□□□□□ -0.61
IFT140-202ENST00000397417 GRM3Q14832 879 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 PCID2Q5JVF3 399 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 SPDYCQ5MJ68 293 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 C17orf99Q6UX52 265 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 CCNJLQ8IV13 435 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 SLC22A17Q8WUG5 538 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 CKAP2Q8WWK9 683 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 DNAJC1Q96KC8 554 aaKnown RBP11.26□□□□□ -0.61
IFT140-202ENST00000397417 ING2Q9H160 280 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 WARS2Q9UGM6 360 aaKnown RBP11.26□□□□□ -0.61
IFT140-202ENST00000397417 TRAV19A0A0A6YYK7 116 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 CFAP73A6NFT4 308 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 RPLP2P05387 115 aaKnown RBP11.26□□□□□ -0.61
IFT140-202ENST00000397417 SLC2A4P14672 509 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 NQO1P15559 274 aaKnown RBP11.26□□□□□ -0.61
IFT140-202ENST00000397417 ALDH9A1P49189 494 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 CPSF6Q16630 551 aaKnown RBP eCLIP11.26□□□□□ -0.61
IFT140-202ENST00000397417 PGS1Q32NB8 556 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 SWT1Q5T5J6 900 aaKnown RBP11.26□□□□□ -0.61
IFT140-202ENST00000397417 C14orf80Q86SX3 495 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 SMG7Q92540 1137 aaKnown RBP11.26□□□□□ -0.61
IFT140-202ENST00000397417 TBCDQ9BTW9 1192 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 CATSPERZQ9NTU4 200 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 TMLHEQ9NVH6 421 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 KCTD3Q9Y597 815 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 MYH4Q9Y623 1939 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
IFT140-202ENST00000397417 GNG14A0A1W2PPG7 69 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms