RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 ZC3H7BQ9UGR2 993 aaKnown RBP13.77□□□□□ -0.21
MCF2L-209ENST00000397036 SLC25A13Q9UJS0 675 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 MYOFQ9NZM1 2061 aa13.77□□□□□ -0.21
MCF2L-209ENST00000397036 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-209ENST00000397036 FAM237BA0A1B0GVD1 139 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-209ENST00000397036 F5H423 210 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-209ENST00000397036 ARNTLO00327 626 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 ZNF821O75541 412 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-209ENST00000397036 ALDH1A2O94788 518 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 ACSL3O95573 720 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 GSRP00390 522 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 CPP00450 1065 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 AGTP01019 485 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 ATP5BP06576 529 aaKnown RBP13.76□□□□□ -0.21
MCF2L-209ENST00000397036 SRCP12931 536 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 ALADP13716 330 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 PGAM1P18669 254 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 MGAT1P26572 445 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 RGRP47804 291 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 SCNN1BP51168 640 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 RHOAP61586 193 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 MSLNQ13421 630 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-209ENST00000397036 HTR4Q13639 388 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 SLC1A5Q15758 541 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 SRLQ86TD4 932 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 ANKMY2Q8IV38 441 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 PLCD3Q8N3E9 789 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 TRIB3Q96RU7 358 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 RANBP9Q96S59 729 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 FICDQ9BVA6 458 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 KIFC1Q9BW19 673 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 UBE2ZQ9H832 354 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-209ENST00000397036 SCUBE2Q9NQ36 999 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 CHMP2BQ9UQN3 213 aa13.76□□□□□ -0.21
MCF2L-209ENST00000397036 GRXCR2A6NFK2 248 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 OTOL1A6NHN0 477 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 SMAD6O43541 496 aaKnown RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 USP12O75317 370 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 BANF1O75531 89 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 NDST3O95803 873 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 FGF1P05230 155 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 IVLP07476 585 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 DLDP09622 509 aaKnown RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 CA4P22748 312 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 ADRA1DP25100 572 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 SESN2P58004 480 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 RPL26P61254 145 aaKnown RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 SNRPD1P62314 119 aaKnown RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 ZNF844Q08AG5 666 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 IFFO1Q0D2I5 559 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 LAMB3Q13751 1172 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 GEN1Q17RS7 908 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 PCID2Q5JVF3 399 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 TMEM215Q68D42 235 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 TDRPQ86YL5 185 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 PHTF2Q8N3S3 785 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 NAT16Q8N8M0 369 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 OR2AP1Q8NGE2 309 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 GSDMBQ8TAX9 411 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 PEX13Q92968 403 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 ZFYVE19Q96K21 471 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 TUBGCP5Q96RT8 1024 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 CDX2Q99626 313 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 CPEB1Q9BZB8 566 aaKnown RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 ACSS3Q9H6R3 686 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 PLAC1Q9HBJ0 212 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 MOCS1Q9NZB8 636 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 SAMD15Q9P1V8 674 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 RIMKLBQ9ULI2 386 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 SOX13Q9UN79 622 aa13.75□□□□□ -0.21
MCF2L-209ENST00000397036 RPL26L1Q9UNX3 145 aaKnown RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 FCF1Q9Y324 198 aaKnown RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 KIF26AQ9ULI4 1882 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-209ENST00000397036 WASH3PC4AMC7 463 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 K7ERQ8 282 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 MBTPS2O43462 519 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 HTRA2O43464 458 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 FZD6O60353 706 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 SOCS5O75159 536 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 USP1O94782 785 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 IGSF6O95976 241 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 PRLP01236 227 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 SHBGP04278 402 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 POLBP06746 335 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 ATXN1LP0C7T5 689 aaKnown RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 PRKCHP24723 683 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 SSTR1P30872 391 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 GDI1P31150 447 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 STX2P32856 288 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 GJA4P35212 333 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 NNMTP40261 264 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 GRM3Q14832 879 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 E2F5Q15329 346 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 ITPRIPL2Q3MIP1 535 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 DGKKQ5KSL6 1271 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 SPANXN3Q5MJ09 141 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 GRAMD4Q6IC98 578 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 UNC5AQ6ZN44 842 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms