RNA–Protein interactions for RNA: ENST00000395253.3

FAM220CP-201, Transcript of family with sequence similarity 220 member C, pseudogene, humanhuman

BASIC

Gene FAM220CP, Length 831 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220CP-201ENST00000395253 RECQLP46063 649 aaPredicted RBP18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 ZNF33AQ06730 810 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 PEAR1Q5VY43 1037 aaPredicted RBP18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 C22orf39Q6P5X5 142 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 C19orf48Q6RUI8 117 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 TP53INP2Q8IXH6 220 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 BBS5Q8N3I7 341 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 PCDH20Q8N6Y1 951 aaKnown RBP18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 TTC13Q8NBP0 860 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 CCNYQ8ND76 341 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 FRS2Q8WU20 508 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 HDAC11Q96DB2 347 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 TSGA13Q96PP4 275 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 PDFQ9HBH1 243 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 HAUS2Q9NVX0 235 aa18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 FARP1Q9Y4F1 1045 aaPredicted RBP18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 SMG1Q96Q15 3661 aaKnown RBP18.05■□□□□ 0.48
FAM220CP-201ENST00000395253 A0A1W2PQF6 199 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 K7ERQ8 282 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 TMCC1O94876 653 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 CCNCP24863 283 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 ADCY2Q08462 1091 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 SLC10A2Q12908 348 aaPredicted RBP18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 CAMK2GQ13555 558 aaPredicted RBP18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 DUOXA1Q1HG43 343 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 COL28A1Q2UY09 1125 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 AADACL2Q6P093 401 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 NPNTQ6UXI9 565 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 LEKR1Q6ZMV7 388 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 ARHGAP36Q6ZRI8 547 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 ARMCX6Q7L4S7 300 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 C17orf53Q8N3J3 647 aaPredicted RBP18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 ZNF366Q8N895 744 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 FATE1Q969F0 183 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 PBKQ96KB5 322 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 OLFM3Q96PB7 478 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 CCDC86Q9H6F5 360 aaKnown RBP18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 SLC6A14Q9UN76 642 aa18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 FCF1Q9Y324 198 aaKnown RBP18.04■□□□□ 0.48
FAM220CP-201ENST00000395253 IGSF10Q6WRI0 2623 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 TCRBV21S2A2A0A5A6 115 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 SMAD6O43541 496 aaKnown RBP18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 RNASEH1O60930 286 aaKnown RBP18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 ZNF189O75820 626 aaPredicted RBP18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 MAP3K6O95382 1288 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 CD160O95971 181 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 PTGER3P43115 390 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 RHOAP61586 193 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 PPIDQ08752 370 aaKnown RBP18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 ELAVL3Q14576 367 aaKnown RBP18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 LBRQ14739 615 aaKnown RBP18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 TMEM92Q6UXU6 159 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 DSG4Q86SJ6 1040 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 SLC13A5Q86YT5 568 aaPredicted RBP18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 PLPP6Q8IY26 295 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 CCDC13Q8IYE1 715 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 TMEFF1Q8IYR6 380 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 OR2T3Q8NH03 318 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 MAIP1Q8WWC4 291 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 HAUS1Q96CS2 278 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 NAPGQ99747 312 aaPredicted RBP18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 CINPQ9BW66 212 aaPredicted RBP18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 GTPBP2Q9BX10 602 aaKnown RBP18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 PRSS16Q9NQE7 514 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 TMEM74BQ9NUR3 256 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 BCCIPQ9P287 314 aaKnown RBP eCLIP18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 SEPT3Q9UH03 358 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 PILRBQ9UKJ0 227 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 GON4LQ3T8J9 2241 aa18.03■□□□□ 0.48
FAM220CP-201ENST00000395253 CTAGE9A4FU28 777 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 HACD1B0YJ81 288 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 MCF2LO15068 1137 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 MATN3O15232 486 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 ALOX15BO15296 676 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 CEP104O60308 925 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 SIN3BO75182 1162 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 NEBLO76041 1014 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 APC2O95996 2303 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 GSRP00390 522 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 ATP1A1P05023 1023 aaKnown RBP18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 PECAM1P16284 738 aaPredicted RBP18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 HSPA9P38646 679 aaKnown RBP18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 RENBPP51606 427 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 SNRPD1P62314 119 aaKnown RBP18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 XRCC4Q13426 336 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 ZNF235Q14590 738 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 CARD16Q5EG05 197 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 C9orf64Q5T6V5 341 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 MARC1Q5VT66 337 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 Q6ZVU0 165 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 TFB1MQ8WVM0 346 aaKnown RBP18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 OR8D1Q8WZ84 308 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 PTPRN2Q92932 1015 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 GDAP1L1Q96MZ0 367 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 FERMT1Q9BQL6 677 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 HERPUD2Q9BSE4 406 aa18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 FRMD8P1Q9BZ68 369 aaPredicted RBP18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 SAE1Q9UBE0 346 aaPredicted RBP18.02■□□□□ 0.48
FAM220CP-201ENST00000395253 SNX12Q9UMY4 172 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms