RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 SLC31A1O15431 190 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 SLC7A4O43246 635 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 SPOPO43791 374 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 FOXD2O60548 495 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 MAFKO60675 156 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 PCDH8O95206 1070 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 NDUFA10O95299 355 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 LCA5LO95447 670 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 POP4O95707 220 aaKnown RBP7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 PEX11BO96011 259 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 KRT1P04264 644 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 COMTP21964 271 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 FECHP22830 423 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 CYLC1P35663 651 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 DPP6P42658 865 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 MARCKSL1P49006 195 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 CCR5P51681 352 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 AFF3P51826 1226 aaKnown RBP7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 NEK3P51956 506 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 LIMK1P53667 647 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 MAXP61244 160 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 GBE1Q04446 702 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 IL10RBQ08334 325 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 FGL2Q14314 439 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 SPA17Q15506 151 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 HLA-BQ31612 363 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 INO80DQ53TQ3 878 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZNF805Q5CZA5 627 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 FBXL19Q6PCT2 694 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 NPNTQ6UXI9 565 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 GDPD4Q6W3E5 623 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 B4GALNT4Q76KP1 1039 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 ADAT2Q7Z6V5 191 aaKnown RBP7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZSWIM9Q86XI8 627 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 CAMK1DQ8IU85 385 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 TMEM139Q8IV31 216 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 RHOT2Q8IXI1 618 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 PGBD5Q8N414 524 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 ATPAF2Q8N5M1 289 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 DEFB124Q8NES8 71 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 PPP1R16AQ96I34 528 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 SERAC1Q96JX3 654 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 CAMK1GQ96NX5 476 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 CINPQ9BW66 212 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 TMEM121BQ9BXQ6 578 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 HDAC8Q9BY41 377 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 GAREM1Q9H706 876 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 FNDC3AQ9Y2H6 1198 aaKnown RBP7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 FADS3Q9Y5Q0 445 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 DUSP10Q9Y6W6 482 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 NUMA1Q14980 2115 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 CXorf51AA0A1B0GTR3 108 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 A0A1W2PR77 199 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 C3orf70A6NLC5 250 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 TM4SF5O14894 197 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 RAD51BO15315 384 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 LATO43561 262 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 OPHN1O60890 802 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 SYPP08247 313 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 KRT7P08729 469 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 TIMP2P16035 220 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 KDELR1P24390 212 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 CDC25BP30305 580 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 SERPINB6P35237 376 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 ARHGAP25P42331 645 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 GRIA4P48058 902 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 SCNN1BP51168 640 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZNF135P52742 658 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 CLDN2P57739 230 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 DYNLT1P63172 113 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 RACK1P63244 317 aaKnown RBP7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 SLC10A2Q12908 348 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZNF235Q14590 738 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 LBRQ14739 615 aaKnown RBP7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 PAFAH1B3Q15102 231 aaKnown RBP7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 PDK2Q15119 407 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 TCEAL1Q15170 157 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZNF284Q2VY69 593 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 PPM1JQ5JR12 505 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 NAPEPLDQ6IQ20 393 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 PSAPL1Q6NUJ1 521 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 RABEPKQ7Z6M1 372 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 SRLQ86TD4 932 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 PRPF39Q86UA1 669 aaKnown RBP7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 TRIM69Q86WT6 500 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 HORMAD1Q86X24 394 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 TMTC1Q8IUR5 882 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 PLPP6Q8IY26 295 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 CCDC170Q8IYT3 715 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 LZTR1Q8N653 840 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 CASKIN2Q8WXE0 1202 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 FAF2Q96CS3 445 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 BAG1Q99933 345 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZNF670Q9BS34 389 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 WRAP53Q9BUR4 548 aaKnown RBP7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 LACRTQ9GZZ8 138 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 PREBQ9HCU5 417 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 DONSONQ9NYP3 566 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 RCOR3Q9P2K3 495 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms