RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ANKRD20A4Q4UJ75 823 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 TCEAL5Q5H9L2 206 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 LY6G5CQ5SRR4 150 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 MPP7Q5T2T1 576 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 TMEM135Q86UB9 458 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 LRRC6Q86X45 466 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 RIBC1Q8N443 379 aaPredicted RBP12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 BCAS4Q8TDM0 211 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 TADA1Q96BN2 335 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 PPP1R2P1Q96PQ5 205 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 BBS2Q9BXC9 721 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 VPS45Q9NRW7 570 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 ABCB8Q9NUT2 735 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 IKBKGQ9Y6K9 419 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 NUP210Q8TEM1 1887 aaPredicted RBP12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 ZCWPW2A0A1B0GU75 182 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 GOLGA8TH3BQL2 631 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 TRIM24O15164 1050 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SMAD6O43541 496 aaKnown RBP12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 ALDH1A2O94788 518 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 PRKCGP05129 697 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 INHBAP08476 426 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 HLA-FP30511 346 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 MDH1P40925 334 aaKnown RBP12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 CTSOP43234 321 aaPredicted RBP12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SEC24CP53992 1094 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 GALNT3Q14435 633 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SLC1A5Q15758 541 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SIRPB2Q5JXA9 342 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 TRIM68Q6AZZ1 485 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 GET4Q7L5D6 327 aaPredicted RBP12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 TRABD2AQ86V40 505 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 CCNJLQ8IV13 435 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 CCDC117Q8IWD4 279 aaPredicted RBP12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 NPAS3Q8IXF0 933 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 TNS4Q8IZW8 715 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 C4orf33Q8N1A6 199 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 BBS5Q8N3I7 341 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 NAT16Q8N8M0 369 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 FIBINQ8TAL6 211 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 IRF7Q92985 503 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 RPL10LQ96L21 214 aaKnown RBP12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 KLF6Q99612 283 aaPredicted RBP12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 NAT9Q9BTE0 207 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 FETUBQ9UGM5 382 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SOX13Q9UN79 622 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 PSAT1Q9Y617 370 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 DOCK8Q8NF50 2099 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 TRIOBPQ9H2D6 2365 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 FAM237BA0A1B0GVD1 139 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SPAG7O75391 227 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 USP1O94782 785 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SERPINF2P08697 491 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 TYRP14679 529 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 ATP5DP30049 168 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 LSP1P33241 339 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 CCT5P48643 541 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 BMPR2Q13873 1038 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SEPT6Q14141 434 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 MPP2Q14168 576 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 PLEKHG6Q3KR16 790 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 FAM78AQ5JUQ0 283 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SPANXN3Q5MJ09 141 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 ATXN7L2Q5T6C5 722 aaPredicted RBP12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 EMC10Q5UCC4 262 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 ALG1LQ6GMV1 187 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 PACS2Q86VP3 889 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SLC26A11Q86WA9 606 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 ADGRG2Q8IZP9 1017 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 DCAF4L2Q8NA75 395 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 MZB1Q8WU39 189 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 MYLIPQ8WY64 445 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 FGF13Q92913 245 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 TM6SF2Q9BZW4 377 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 KCNK9Q9NPC2 374 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SPHK2Q9NRA0 654 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 KIAA1522Q9P206 1035 aaPredicted RBP12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SLC2A6Q9UGQ3 507 aa12.33□□□□□ -0.44
SPTBN1-203ENST00000389980 SOBPA7XYQ1 873 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 ANKRD65E5RJM6 399 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 GOLGA8RI6L899 631 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 INSIG1O15503 277 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 ATXN1LP0C7T5 689 aaKnown RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 PIRTP0C851 137 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 BRAFP15056 766 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 CHN1P15882 459 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 CR2P20023 1033 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 FSHRP23945 695 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 CDK18Q07002 472 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 RFTN1Q14699 578 aaPredicted RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 PCID2Q5JVF3 399 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 RNF43Q68DV7 783 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 SYCE2Q6PIF2 218 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 TAOK1Q7L7X3 1001 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 RASSF3Q86WH2 238 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 CELF5Q8N6W0 485 aaKnown RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 OR6K2Q8NGY2 324 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 TTC17Q96AE7 1141 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 IFT43Q96FT9 208 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms