RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 OGDHLQ9ULD0 1010 aa1.09□□□□□ -2.23
SNORA40-201ENST00000388090 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.09□□□□□ -2.23
SNORA40-201ENST00000388090 NTNG1Q9Y2I2 539 aa1.09□□□□□ -2.23
SNORA40-201ENST00000388090 ZBTB1Q9Y2K1 713 aa1.09□□□□□ -2.23
SNORA40-201ENST00000388090 PSAT1Q9Y617 370 aa1.09□□□□□ -2.23
SNORA40-201ENST00000388090 COPG1Q9Y678 874 aaKnown RBP1.09□□□□□ -2.23
SNORA40-201ENST00000388090 ABCA7Q8IZY2 2146 aa1.09□□□□□ -2.24
SNORA40-201ENST00000388090 F8W8V4 182 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 DHX16O60231 1041 aaKnown RBP1.08□□□□□ -2.24
SNORA40-201ENST00000388090 TAF5LO75529 589 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 VIPP01282 170 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 IGKV3-15P01624 115 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 ANXA2P07355 339 aaKnown RBP1.08□□□□□ -2.24
SNORA40-201ENST00000388090 ERVK-10P10266 1014 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 ITGA9Q13797 1035 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 CAPRIN1Q14444 709 aaKnown RBP1.08□□□□□ -2.24
SNORA40-201ENST00000388090 SLC5A9Q2M3M2 681 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 ARHGAP15Q53QZ3 475 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 SFMBT2Q5VUG0 894 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 IRAK1BP1Q5VVH5 260 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 ANKRD40Q6AI12 368 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 SLC27A1Q6PCB7 646 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 ZNF613Q6PF04 617 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 ZNF852Q6ZMS4 543 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 PRPF38AQ8NAV1 312 aaKnown RBP1.08□□□□□ -2.24
SNORA40-201ENST00000388090 BBS10Q8TAM1 723 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 CLEC4CQ8WTT0 213 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 FAR1Q8WVX9 515 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 ABHD8Q96I13 439 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 LINC00167Q96N53 147 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 PLEKHA5Q9HAU0 1116 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 ZNF287Q9HBT7 754 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 NMRK2Q9NPI5 230 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 OR6C3Q9NZP0 311 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 DLGAP2Q9P1A6 1054 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 CRCT1Q9UGL9 99 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 IP6K2Q9UHH9 426 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 SLC12A4Q9UP95 1085 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 OSGIN2Q9Y236 505 aa1.08□□□□□ -2.24
SNORA40-201ENST00000388090 RHPN2P1A8MT19 583 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 ALG1L2C9J202 215 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 SH2B2O14492 632 aaPredicted RBP1.07□□□□□ -2.24
SNORA40-201ENST00000388090 DDAH2O95865 285 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 HLA-DQA2P01906 255 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 CD48P09326 243 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 HSPA6P17066 643 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 HOXB9P17482 250 aaPredicted RBP1.07□□□□□ -2.24
SNORA40-201ENST00000388090 FAM3BP58499 235 aaPredicted RBP1.07□□□□□ -2.24
SNORA40-201ENST00000388090 EVA1CP58658 441 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 CSHL1Q14406 222 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 TBC1D9BQ66K14 1250 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 SDE2Q6IQ49 451 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 FAM122CQ6P4D5 195 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 GFRALQ6UXV0 394 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 ATF7IPQ6VMQ6 1270 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 WDR5BQ86VZ2 330 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 ODF3L1Q8IXM7 274 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 CREB3L4Q8TEY5 395 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 CHMP4CQ96CF2 233 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 APIPQ96GX9 242 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 AIFM3Q96NN9 605 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 TRIM51Q9BSJ1 452 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 LRRC1Q9BTT6 524 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 MMTAG2Q9BU76 263 aaKnown RBP1.07□□□□□ -2.24
SNORA40-201ENST00000388090 C2orf42Q9NWW7 574 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 ASIC3Q9UHC3 531 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 ZMYND8Q9ULU4 1186 aaPredicted RBP1.07□□□□□ -2.24
SNORA40-201ENST00000388090 CELA1Q9UNI1 258 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 FAF1Q9UNN5 650 aaPredicted RBP1.07□□□□□ -2.24
SNORA40-201ENST00000388090 PAM16Q9Y3D7 125 aa1.07□□□□□ -2.24
SNORA40-201ENST00000388090 ATXN2Q99700 1313 aaKnown RBP1.07□□□□□ -2.24
SNORA40-201ENST00000388090 AREL1O15033 823 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 HSPA12AO43301 675 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 IGSF3O75054 1194 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 RFPL2O75678 378 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 FCGR2AP12318 317 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 PECAM1P16284 738 aaPredicted RBP1.06□□□□□ -2.24
SNORA40-201ENST00000388090 GRK5P34947 590 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 HNRNPKP61978 463 aaKnown RBP eCLIP1.06□□□□□ -2.24
SNORA40-201ENST00000388090 TNFAIP2Q03169 654 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 FAM27E3Q08E93 113 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 SLC25A30Q5SVS4 291 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 NCAPH2Q6IBW4 605 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 FAM166AQ6J272 317 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 ZBTB46Q86UZ6 589 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 TMEM219Q86XT9 240 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 TMC8Q8IU68 726 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.06□□□□□ -2.24
SNORA40-201ENST00000388090 DSELQ8IZU8 1212 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 LSM14AQ8ND56 463 aaKnown RBP1.06□□□□□ -2.24
SNORA40-201ENST00000388090 ZPLD1Q8TCW7 415 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 TM9SF4Q92544 642 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 PKP2Q99959 881 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 LRRC27Q9C0I9 530 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 PCDHAC1Q9H158 963 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 MVB12BQ9H7P6 319 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 C1RLQ9NZP8 487 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 TMEM181Q9P2C4 612 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 KLK13Q9UKR3 277 aa1.06□□□□□ -2.24
SNORA40-201ENST00000388090 RAB21Q9UL25 225 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms