RNA–Protein interactions for RNA: ENST00000377465.5

SEC23B-203, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-203ENST00000377465 KCTD11Q693B1 232 aa10.95□□□□□ -0.66
SEC23B-203ENST00000377465 Q6ZNX1 250 aa10.95□□□□□ -0.66
SEC23B-203ENST00000377465 RBM44Q6ZP01 1051 aaKnown RBP10.95□□□□□ -0.66
SEC23B-203ENST00000377465 CCDC149Q6ZUS6 474 aa10.95□□□□□ -0.66
SEC23B-203ENST00000377465 IQCF2Q8IXL9 164 aa10.95□□□□□ -0.66
SEC23B-203ENST00000377465 OR12D3Q9UGF7 316 aa10.95□□□□□ -0.66
SEC23B-203ENST00000377465 PCDHA11Q9Y5I1 949 aa10.95□□□□□ -0.66
SEC23B-203ENST00000377465 FADS3Q9Y5Q0 445 aa10.95□□□□□ -0.66
SEC23B-203ENST00000377465 E9PBE3 544 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 H7C0C1 242 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 EIF3FO00303 357 aaPredicted RBP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 PAGE1O75459 146 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 LRIG2O94898 1065 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 CPA3P15088 417 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 ERCC2P18074 760 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 OR1D2P34982 312 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 GARSP41250 739 aaKnown RBP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 ATP5OP48047 213 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 CLCN4P51793 760 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 ERVK-21P61565 698 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 TAF10Q12962 218 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 CDC16Q13042 620 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 DUSP4Q13115 394 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 THOC5Q13769 683 aaKnown RBP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 SMUG1Q53HV7 270 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 C16orf87Q6PH81 154 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 PYROXD2Q8N2H3 581 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 BBS5Q8N3I7 341 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 HTR3CQ8WXA8 447 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 YME1L1Q96TA2 773 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 DNMT3LQ9UJW3 386 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 SPAG6O75602 509 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 ZWINTO95229 277 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 PEX11BO96011 259 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 HNRNPA1P09651 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 TBX4P57082 545 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 TPI1P60174 286 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 GBE1Q04446 702 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 WASHC5Q12768 1159 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 HNRNPDQ14103 355 aaKnown RBP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 CTC1Q2NKJ3 1217 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 MS4A13Q5J8X5 152 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 STEAP4Q687X5 459 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 C10orf82Q8WW14 230 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 MCUR1Q96AQ8 359 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 ZNF599Q96NL3 588 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 EBF3Q9H4W6 596 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 C2orf71A6NGG8 1288 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 NT5C1B-RDH14C9J2C7 533 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 E9PAM4 449 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 AP3B1O00203 1094 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 TEX28O15482 410 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 SPAG7O75391 227 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 TTC4O95801 387 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 MYCP01106 439 aaPredicted RBP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 COL6A2P12110 1019 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 ANPEPP15144 967 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 ACADVLP49748 655 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 CLCN2P51788 898 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 IFRD2Q12894 506 aaPredicted RBP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 PDIA2Q13087 525 aaKnown RBP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 KCNC3Q14003 757 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 SPIDRQ14159 915 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 BBS9Q3SYG4 887 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 ZNF534Q76KX8 674 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 PATL1Q86TB9 770 aaKnown RBP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 VPS52Q8N1B4 723 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 CPXM2Q8N436 756 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 MRPL43Q8N983 215 aaKnown RBP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 SPPL3Q8TCT6 385 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 B3GALT6Q96L58 329 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 PRICKLE1Q96MT3 831 aaPredicted RBP10.94□□□□□ -0.66
SEC23B-203ENST00000377465 NINJ2Q9NZG7 142 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 PRKAG2Q9UGJ0 569 aa10.94□□□□□ -0.66
SEC23B-203ENST00000377465 COL4A2P08572 1712 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 LINC01553A4QN01 128 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 H3BNC9 293 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 GYG2O15488 501 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 PSMD3O43242 534 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 C1QAP02745 245 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 AMPD1P23109 780 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 PSMA3P25788 255 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 NEK2P51955 445 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 RELAQ04206 551 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 DNAJC3Q13217 504 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 TIGD7Q6NT04 549 aaPredicted RBP10.93□□□□□ -0.66
SEC23B-203ENST00000377465 DARS2Q6PI48 645 aaKnown RBP10.93□□□□□ -0.66
SEC23B-203ENST00000377465 CLNKQ7Z7G1 428 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 ALDH16A1Q8IZ83 802 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 NPWQ8N729 165 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 EMILIN2Q9BXX0 1053 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 FAM32AQ9Y421 112 aaKnown RBP10.93□□□□□ -0.66
SEC23B-203ENST00000377465 PDE4DIPQ5VU43 2346 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 CBFA2T3O75081 653 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 KRT15P19012 456 aa10.93□□□□□ -0.66
SEC23B-203ENST00000377465 VASPP50552 380 aaPredicted RBP10.93□□□□□ -0.66
SEC23B-203ENST00000377465 YBEYP58557 167 aaPredicted RBP10.93□□□□□ -0.66
SEC23B-203ENST00000377465 TBL3Q12788 808 aaKnown RBP10.93□□□□□ -0.66
SEC23B-203ENST00000377465 MED21Q13503 144 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms