RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 LRCH4O75427 683 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 PAPSS2O95340 614 aaPredicted RBP12.6□□□□□ -0.39
VRK3-202ENST00000377011 APOC2P02655 101 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 APODP05090 189 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 KDELR1P24390 212 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 EIF2DP41214 584 aaKnown RBP12.6□□□□□ -0.39
VRK3-202ENST00000377011 GRIA2P42262 883 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 GABRB2P47870 512 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 RPS24P62847 133 aaKnown RBP12.6□□□□□ -0.39
VRK3-202ENST00000377011 ZNF528Q3MIS6 628 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 SH3PXD2AQ5TCZ1 1133 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 KIAA1211LQ6NV74 962 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 ADGRD1Q6QNK2 874 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 AGGF1Q8N302 714 aaeCLIP12.6□□□□□ -0.39
VRK3-202ENST00000377011 CPXM2Q8N436 756 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 JOSD2Q8TAC2 188 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 ACTL9Q8TC94 416 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 LRRC8CQ8TDW0 803 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 DDI1Q8WTU0 396 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 N4BP2L2Q92802 583 aaPredicted RBP12.6□□□□□ -0.39
VRK3-202ENST00000377011 RMDN2Q96LZ7 410 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 MAGEB5Q9BZ81 275 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 LRMDAQ9H2I8 198 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 MLXIPLQ9NP71 852 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 CD93Q9NPY3 652 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 RABGEF1Q9UJ41 708 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 PHTF1Q9UMS5 762 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 INVSQ9Y283 1065 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.6□□□□□ -0.39
VRK3-202ENST00000377011 RAD54BQ9Y620 910 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 POC1B-GALNT4F8VUJ3 575 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 CAPN9O14815 690 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 ZSCAN5DPP0CG00 497 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 CA4P22748 312 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 HLA-FP30511 346 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 PCK1P35558 622 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 HARS2P49590 506 aaKnown RBP12.59□□□□□ -0.39
VRK3-202ENST00000377011 DGKGP49619 791 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 KCNJ2P63252 427 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 OTUD4Q01804 1114 aaKnown RBP12.59□□□□□ -0.39
VRK3-202ENST00000377011 FSCBQ5H9T9 825 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 ADGRF1Q5T601 910 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 PIK3R6Q5UE93 754 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 RAP1GAP2Q684P5 730 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 GRAMD4Q6IC98 578 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 SLC26A9Q7LBE3 791 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 CIR1Q86X95 450 aaPredicted RBP12.59□□□□□ -0.39
VRK3-202ENST00000377011 CFAP61Q8NHU2 1237 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 PYROXD1Q8WU10 500 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 CPT1BQ92523 772 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 TMEM121Q9BTD3 319 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 SLC6A17Q9H1V8 727 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 PIGVQ9NUD9 493 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 ZSCAN32Q9NX65 697 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 TLR6Q9Y2C9 796 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 MUC22E2RYF6 1773 aaPredicted RBP12.59□□□□□ -0.39
VRK3-202ENST00000377011 GON4LQ3T8J9 2241 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 KCNU1A8MYU2 1149 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 GFRA3O60609 400 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 DAB1O75553 588 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 FAM155BO75949 473 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 STIP1P31948 543 aaKnown RBP12.59□□□□□ -0.39
VRK3-202ENST00000377011 CD70P32970 193 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 RFC1P35251 1148 aaPredicted RBP12.59□□□□□ -0.39
VRK3-202ENST00000377011 MSH2P43246 934 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 RASSF2P50749 326 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 ATP11AP98196 1134 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 MGAT5Q09328 741 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 NME3Q13232 169 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 FASTKD3Q14CZ7 662 aaKnown RBP12.59□□□□□ -0.39
VRK3-202ENST00000377011 FBXO43Q4G163 708 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 FAM102AQ5T9C2 384 aaPredicted RBP12.59□□□□□ -0.39
VRK3-202ENST00000377011 HHATQ5VTY9 493 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 TXNRD3NBQ6F5E7 133 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 BEND5Q7L4P6 421 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 SYT13Q7L8C5 426 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 C14orf80Q86SX3 495 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 PRUNE1Q86TP1 453 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 VSIG1Q86XK7 387 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 PDIK1LQ8N165 341 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 LMLNQ96KR4 655 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 SERPINB11Q96P15 392 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 TBCBQ99426 244 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 NPY6RQ99463 290 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 TPSD1Q9BZJ3 242 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 SYNCQ9H7C4 482 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 DDIT4Q9NX09 232 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 CACNA2D2Q9NY47 1150 aa12.59□□□□□ -0.39
VRK3-202ENST00000377011 SPAG17Q6Q759 2223 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 CEP250Q9BV73 2442 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 A0A1W2PQF6 199 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 FOXO6A8MYZ6 492 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 TRAFD1O14545 582 aaPredicted RBP12.58□□□□□ -0.4
VRK3-202ENST00000377011 MCF2LO15068 1137 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 CST8O60676 142 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 TBL1XO60907 577 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 ENDOD1O94919 500 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 IFNB1P01574 187 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 IL1BP01584 269 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 ETS1P14921 441 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms