RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 GAS6Q14393 721 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 PAGE2BQ5JRK9 111 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 SAPCD1Q5SSQ6 148 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 TAS2R42Q7RTR8 314 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 RTN4RL1Q86UN2 441 aaPredicted RBP9.15□□□□□ -0.94
UBR4-201ENST00000375218 FJX1Q86VR8 437 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 KAT2BQ92831 832 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 USP28Q96RU2 1077 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 HEMGNQ9BXL5 484 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 CYP46A1Q9Y6A2 500 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 C3orf80F5H4A9 247 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 CDC25AP30304 524 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 GNG10P50151 68 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 PPATQ06203 517 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 TYRO3Q06418 890 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 CHRNA6Q15825 494 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 C12orf60Q5U649 245 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 TIGD7Q6NT04 549 aaPredicted RBP9.15□□□□□ -0.95
UBR4-201ENST00000375218 ERN2Q76MJ5 926 aaKnown RBP9.15□□□□□ -0.95
UBR4-201ENST00000375218 SLC13A3Q8WWT9 602 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 CACNG6Q9BXT2 260 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 SLC25A18Q9H1K4 315 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 DDX4Q9NQI0 724 aaKnown RBP9.15□□□□□ -0.95
UBR4-201ENST00000375218 TMEM39AQ9NV64 488 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 MYO1AQ9UBC5 1043 aa9.15□□□□□ -0.95
UBR4-201ENST00000375218 USP15Q9Y4E8 981 aaPredicted RBP9.15□□□□□ -0.95
UBR4-201ENST00000375218 ATRNL1Q5VV63 1379 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 C2orf92A0A1B0GVN3 265 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 TARM1B6A8C7 271 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 CLPXO76031 633 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 SERPINA3P01011 423 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 TRHRP34981 398 aaPredicted RBP9.14□□□□□ -0.95
UBR4-201ENST00000375218 GPC1P35052 558 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 KCNC1P48547 511 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 RAD23AP54725 363 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 GPX6P59796 221 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 TGM3Q08188 693 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 ZNF543Q08ER8 600 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 MAMLD1Q13495 774 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 FLYWCH1Q4VC44 716 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 ETFRF1Q6IPR1 90 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 NSUN7Q8NE18 718 aaKnown RBP9.14□□□□□ -0.95
UBR4-201ENST00000375218 ZNF707Q96C28 371 aaPredicted RBP9.14□□□□□ -0.95
UBR4-201ENST00000375218 GBA3Q9H227 469 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 ZNF275Q9NSD4 429 aaPredicted RBP9.14□□□□□ -0.95
UBR4-201ENST00000375218 PSMC3IPQ9P2W1 217 aaPredicted RBP9.14□□□□□ -0.95
UBR4-201ENST00000375218 PCDHGA10Q9Y5H3 936 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 GPR45Q9Y5Y3 372 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 BTBD19C9JJ37 291 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 DGAT1O75907 488 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 SEMA3DO95025 777 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 NOVP48745 357 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 POLGP54098 1239 aaPredicted RBP9.14□□□□□ -0.95
UBR4-201ENST00000375218 FBXO46Q6PJ61 603 aaPredicted RBP9.14□□□□□ -0.95
UBR4-201ENST00000375218 CNTN4Q8IWV2 1026 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 OR8K5Q8NH50 307 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 RIMS4Q9H426 269 aaPredicted RBP9.14□□□□□ -0.95
UBR4-201ENST00000375218 ZKSCAN5Q9Y2L8 839 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 TEX46H3BTG2 121 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 NKRFO15226 690 aaKnown RBP eCLIP9.14□□□□□ -0.95
UBR4-201ENST00000375218 KMOO15229 486 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 OXSR1O95747 527 aaPredicted RBP9.14□□□□□ -0.95
UBR4-201ENST00000375218 CHRNB1P11230 501 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 SLC7A2P52569 658 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 GIT2Q14161 759 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 PLA1AQ53H76 456 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 THEM4Q5T1C6 240 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 FAM122CQ6P4D5 195 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 RIOX2Q8IUF8 465 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 SLITRK4Q8IW52 837 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 OR8J1Q8NGP2 316 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 TRIB2Q92519 343 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 RSC1A1Q92681 617 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 WNT8BQ93098 351 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 CENPMQ9NSP4 180 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 ZNF358Q9NW07 568 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 PCDHA11Q9Y5I1 949 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 HEY1Q9Y5J3 304 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 DOCK5Q9H7D0 1870 aa9.14□□□□□ -0.95
UBR4-201ENST00000375218 CD3EAPO15446 510 aaKnown RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 AKAP8O43823 692 aaKnown RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 CLEC3BP05452 202 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 KRT3P12035 628 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 ALDH7A1P49419 539 aaKnown RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 BCAP31P51572 246 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 TAS2R40P59535 323 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 TSPAN5P62079 268 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 PLOD1Q02809 727 aaPredicted RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 TAF1BQ53T94 588 aaPredicted RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 MFSD7Q6UXD7 560 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 SIAH1Q8IUQ4 282 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 PDLIM2Q96JY6 352 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 CEP19Q96LK0 163 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 TUBGCP5Q96RT8 1024 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 AGAP2Q99490 1192 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 DSCC1Q9BVC3 393 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 NUP62CLQ9H1M0 184 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 TAF1DQ9H5J8 278 aaPredicted RBP9.13□□□□□ -0.95
UBR4-201ENST00000375218 SYTL2Q9HCH5 934 aa9.13□□□□□ -0.95
UBR4-201ENST00000375218 VPS51Q9UID3 782 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms