RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 Q8NA96 180 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 TTC8Q8TAM2 541 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 PARD3BQ8TEW8 1205 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 NTN5Q8WTR8 489 aaPredicted RBP5.04□□□□□ -1.6
USP48-202ENST00000374730 SLC20A1Q8WUM9 679 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 FAXDC2Q96IV6 333 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 CEP170P1Q96L14 293 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 NT5C1BQ96P26 610 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 DUSP26Q9BV47 211 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 TEX13BQ9BXU2 312 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 DDX47Q9H0S4 455 aaKnown RBP5.04□□□□□ -1.6
USP48-202ENST00000374730 RAB17Q9H0T7 212 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 THAP2Q9H0W7 228 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 ACAD9Q9H845 621 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 ATP6V0A4Q9HBG4 840 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 KIAA1586Q9HCI6 787 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 KMT5AQ9NQR1 393 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 XPNPEP1Q9NQW7 623 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 FAM114A2Q9NRY5 505 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 KCTD5Q9NXV2 234 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 TAS2R14Q9NYV8 317 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 ZIM2Q9NZV7 527 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.04□□□□□ -1.6
USP48-202ENST00000374730 CNOT7Q9UIV1 285 aaKnown RBP5.04□□□□□ -1.6
USP48-202ENST00000374730 TLK1Q9UKI8 766 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 GTF3C4Q9UKN8 822 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 TRHDEQ9UKU6 1024 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 COG5Q9UP83 839 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 RIPK3Q9Y572 518 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 IPPQ9Y573 584 aa5.04□□□□□ -1.6
USP48-202ENST00000374730 ARHGEF17Q96PE2 2063 aaPredicted RBP5.04□□□□□ -1.6
USP48-202ENST00000374730 UTRNP46939 3433 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 GRIN2DO15399 1336 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 ADGRA3Q8IWK6 1321 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 A0A1W2PS29 197 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 TMEM150BA6NC51 233 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 ZNF233A6NK53 670 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 CCDC169A6NNP5 214 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 ANKRD63C9JTQ0 380 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 GRM6O15303 877 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 EIF3HO15372 352 aaKnown RBP eCLIP5.03□□□□□ -1.6
USP48-202ENST00000374730 EXTL3O43909 919 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 ZFPL1O95159 310 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 LDHAP00338 332 aaKnown RBP5.03□□□□□ -1.6
USP48-202ENST00000374730 MT-CO1P00395 513 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 FGGP02679 453 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 FTLP02792 175 aaPredicted RBP5.03□□□□□ -1.6
USP48-202ENST00000374730 CYP1A2P05177 515 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 SUPT20HL2P0C7V6 817 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 CYP11B1P15538 503 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 ABCB4P21439 1286 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 CTNNA2P26232 953 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 SLC6A4P31645 630 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 PLA2G5P39877 138 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 PDE6CP51160 858 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 DRG2P55039 364 aaKnown RBP5.03□□□□□ -1.6
USP48-202ENST00000374730 ACTR2P61160 394 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 SIM1P81133 766 aaPredicted RBP5.03□□□□□ -1.6
USP48-202ENST00000374730 FMO1Q01740 532 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 CDR2Q01850 454 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 PRKCEQ02156 737 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 MAP2K1Q02750 393 aaPredicted RBP5.03□□□□□ -1.6
USP48-202ENST00000374730 PRPF4BQ13523 1007 aaKnown RBP5.03□□□□□ -1.6
USP48-202ENST00000374730 ACAP2Q15057 778 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 CYP1B1Q16678 543 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 GEN1Q17RS7 908 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 SUPT20HL1Q3ZLR7 823 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 FAM153CQ494X1 144 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 XKR3Q5GH77 459 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 MIS18BP1Q6P0N0 1132 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 FBXO42Q6P3S6 717 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 SLC39A4Q6P5W5 647 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 LRRC31Q6UY01 552 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 KDM7AQ6ZMT4 941 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 CATSPERGQ6ZRH7 1159 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 C15orf39Q6ZRI6 1047 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 DEFB132Q7Z7B7 95 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 ZNF677Q86XU0 584 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 GPD1LQ8N335 351 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 UBL4BQ8N7F7 174 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 FAM98AQ8NCA5 519 aaKnown RBP5.03□□□□□ -1.6
USP48-202ENST00000374730 FBXL13Q8NEE6 735 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 IL17RDQ8NFM7 739 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 ATP8B4Q8TF62 1192 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 IFT81Q8WYA0 676 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 SEMA4DQ92854 862 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 KAT5Q92993 513 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 CD101Q93033 1021 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 PTCD3Q96EY7 689 aaKnown RBP5.03□□□□□ -1.6
USP48-202ENST00000374730 IFT74Q96LB3 600 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 RUNDC3BQ96NL0 473 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 PCDHB18PQ96TA0 734 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 AIFM2Q9BRQ8 373 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 AP1M1Q9BXS5 423 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 CAPS2Q9BXY5 557 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 FAM129AQ9BZQ8 928 aa5.03□□□□□ -1.6
USP48-202ENST00000374730 A1CFQ9NQ94 594 aaKnown RBP5.03□□□□□ -1.6
USP48-202ENST00000374730 SEPT11Q9NVA2 429 aaKnown RBP5.03□□□□□ -1.6
USP48-202ENST00000374730 RAB20Q9NX57 234 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms