RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CLCN5P51795 746 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 JAM2P57087 298 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 SUN5Q8TC36 379 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 GIPC3Q8TF64 312 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 C17orf50Q8WW18 174 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 HSFY1Q96LI6 401 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 DGCR6LQ9BY27 220 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 LNPEPQ9UIQ6 1025 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 CRYL1Q9Y2S2 319 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 RAP2CQ9Y3L5 183 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
LMX1B-202ENST00000373474 ALDH2P05091 517 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 VCLP18206 1134 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 RCVRNP35243 200 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 PSEN2P49810 448 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 TAF5Q15542 800 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 TSC22D1Q15714 1073 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 ZC3H12AQ5D1E8 599 aaKnown RBP14.34□□□□□ -0.11
LMX1B-202ENST00000373474 IL27RAQ6UWB1 636 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 NECAB2Q7Z6G3 386 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 MED8Q96G25 268 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 TPD52L3Q96J77 140 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 MIEF1Q9NQG6 463 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 GRIN3BO60391 1043 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 ITGA2BP08514 1039 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 OR56A5P0C7T3 313 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 PRKAR1AP10644 381 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 NAA20P61599 178 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 ZNF671Q8TAW3 534 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 EEF1AKMT1Q8WVE0 214 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 MYDGFQ969H8 173 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 TSEN34Q9BSV6 310 aaKnown RBP14.34□□□□□ -0.11
LMX1B-202ENST00000373474 SPAG4Q9NPE6 437 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 SEMA4BQ9NPR2 832 aaPredicted RBP14.34□□□□□ -0.11
LMX1B-202ENST00000373474 PFDN2Q9UHV9 154 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 ZNF222Q9UK12 451 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 TRPV2Q9Y5S1 764 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 TCRBV9S1A1TA0A576 114 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 SNAP91O60641 907 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 CKMP06732 381 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 BDNFP23560 247 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 UGCGQ16739 394 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 ITIH5Q86UX2 942 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 ARL10Q8N8L6 244 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 STARD8Q92502 1023 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 ABCB10Q9NRK6 738 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 SEMA3DO95025 777 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 ABCG1P45844 678 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 PSME3P61289 254 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 PHKG1Q16816 387 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 OOSP2Q86WS3 158 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 STK40Q8N2I9 435 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 SPPL2AQ8TCT8 520 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 AP3S1Q92572 193 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 SERAC1Q96JX3 654 aa14.34□□□□□ -0.11
LMX1B-202ENST00000373474 WBP11Q9Y2W2 641 aaKnown RBP14.34□□□□□ -0.11
LMX1B-202ENST00000373474 TNPO3Q9Y5L0 923 aaKnown RBP14.34□□□□□ -0.11
LMX1B-202ENST00000373474 BCL9LQ86UU0 1499 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 TTLL13PA6NNM8 815 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 HAT1O14929 419 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 URODP06132 367 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 NFKB1P19838 968 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 RAB10P61026 200 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 SLC39A12Q504Y0 691 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 LIPMQ5VYY2 423 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.33□□□□□ -0.11
LMX1B-202ENST00000373474 SFRP1Q8N474 314 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 OR5B17Q8NGF7 314 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 REPS1Q96D71 796 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 FGFBP2Q9BYJ0 223 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 CDH19Q9H159 772 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 MTIF3Q9H2K0 278 aaKnown RBP14.33□□□□□ -0.11
LMX1B-202ENST00000373474 PNPLA3Q9NST1 481 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 INVSQ9Y283 1065 aa14.33□□□□□ -0.11
LMX1B-202ENST00000373474 MON2Q7Z3U7 1717 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 TSPAN3O60637 253 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 ZMPSTE24O75844 475 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 PTPRAP18433 802 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 BICRALQ6AI39 1079 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 POP5Q969H6 163 aaKnown RBP14.33□□□□□ -0.12
LMX1B-202ENST00000373474 MRPL57Q9BQC6 102 aaKnown RBP14.33□□□□□ -0.12
LMX1B-202ENST00000373474 CMTM6Q9NX76 183 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 ARHGAP28Q9P2N2 729 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 GRK3P35626 688 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 RETSATQ6NUM9 610 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 AADATQ8N5Z0 425 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 STAG3L4Q8TBR4 150 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 SENP8Q96LD8 212 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 KLHL32Q96NJ5 620 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 ADI1Q9BV57 179 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 CDT1Q9H211 546 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 SLCO1B3Q9NPD5 702 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 FBXO6Q9NRD1 293 aaPredicted RBP14.33□□□□□ -0.12
LMX1B-202ENST00000373474 AHSPQ9NZD4 102 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 MRC1P22897 1456 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 LYPLA2O95372 231 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 CCDC166P0CW27 439 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 ARPC4P59998 168 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 PERM1Q5SV97 790 aa14.33□□□□□ -0.12
LMX1B-202ENST00000373474 EIF3MQ7L2H7 374 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms