RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 GRTP1Q5TC63 336 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 LILRA6Q6PI73 481 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 RNF111Q6ZNA4 994 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 PQLC1Q8N2U9 271 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 PCDH19Q8TAB3 1148 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 RDH11Q8TC12 318 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 TRPC4APQ8TEL6 797 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 CLPTM1LQ96KA5 538 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 SNX27Q96L92 541 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 PRICKLE1Q96MT3 831 aaPredicted RBP11.7□□□□□ -0.54
USF1-201ENST00000368019 SORT1Q99523 831 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 CPNE1Q99829 537 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 SNRNP25Q9BV90 132 aaKnown RBP11.7□□□□□ -0.54
USF1-201ENST00000368019 SLC4A5Q9BY07 1137 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 GPR62Q9BZJ7 368 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 SLC13A1Q9BZW2 595 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 ELOVL4Q9GZR5 314 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 MFSD1Q9H3U5 465 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 EPS15L1Q9UBC2 864 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 COPG2Q9UBF2 871 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 TJP2Q9UDY2 1190 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 DTNAQ9Y4J8 743 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 NOTCH4Q99466 2003 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 A0A0A0MRY4 1105 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 GOLGA8QA0A0J9YX86 632 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 GOLGA8OA6NCC3 632 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 KPNA7A9QM74 516 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 GOLGA8NF8WBI6 632 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 SLCO1B7G3V0H7 640 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 H3BNX3 289 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 INO80B-WBP1J3KQ70 363 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 NARSO43776 548 aaKnown RBP11.69□□□□□ -0.54
USF1-201ENST00000368019 AVILO75366 819 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 RFPL2O75678 378 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 PIAS1O75925 651 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 USP1O94782 785 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 MPOP05164 745 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 SMIM18P0DKX4 95 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 THRAP10827 490 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 MCF2P10911 925 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 COX4I1P13073 169 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 SDC4P31431 198 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 GP5P40197 560 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 HADHAP40939 763 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 SLC25A3Q00325 362 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 TBL3Q12788 808 aaKnown RBP11.69□□□□□ -0.54
USF1-201ENST00000368019 KLF10Q13118 480 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 ATF7IP2Q5U623 682 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 IRAK1BP1Q5VVH5 260 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 TRNP1Q6NT89 227 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 TRMT10BQ6PF06 316 aaKnown RBP11.69□□□□□ -0.54
USF1-201ENST00000368019 C1orf228Q6PIY5 440 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 EPGNQ6UW88 154 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 SCARA5Q6ZMJ2 495 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 FAM183BPQ6ZVS7 135 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 SPATA24Q86W54 205 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 TICAM1Q8IUC6 712 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 FLCNQ8NFG4 579 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 CXorf38Q8TB03 319 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 SLC7A14Q8TBB6 771 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 RNF217Q8TC41 542 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 SLC26A7Q8TE54 656 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 SPATA13Q96N96 652 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 MYADMQ96S97 322 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 FERMT1Q9BQL6 677 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 COLEC11Q9BWP8 271 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 APOL6Q9BWW8 343 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 CDH19Q9H159 772 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 NXF3Q9H4D5 531 aaKnown RBP11.69□□□□□ -0.54
USF1-201ENST00000368019 FNIP2Q9P278 1114 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 WNT16Q9UBV4 365 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 DPP7Q9UHL4 492 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 SIX4Q9UIU6 781 aa11.69□□□□□ -0.54
USF1-201ENST00000368019 C15orf38-AP3S2A0A0A6YYH1 394 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 ARHGAP10A1A4S6 786 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 KRBA1A5PL33 1030 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 B4GALT5O43286 388 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 ITM2AO43736 263 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 UGT1A9O60656 530 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 OPHN1O60890 802 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 TNFAIP8O95379 198 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 ALDOAP04075 364 aaKnown RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 KITP10721 976 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 RALBP11234 206 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 GLDCP23378 1020 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 CYP2F1P24903 491 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 PEX2P28328 305 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 SERPINB8P50452 374 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 AQP4P55087 323 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 RPL10AP62906 217 aaKnown RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 SLC6A3Q01959 620 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 PDE1CQ14123 709 aaPredicted RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 CCDC14Q49A88 953 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 PKDCCQ504Y2 493 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 MDH1BQ5I0G3 518 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 MROH9Q5TGP6 573 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 SCARA3Q6AZY7 606 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 OR6B2Q6IFH4 312 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 FUT10Q6P4F1 479 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 KLC3Q6P597 504 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms