RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 ARRDC3Q96B67 414 aa19.41■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TRIM44Q96DX7 344 aaPredicted RBP19.41■□□□□ 0.7
HLA-DRB1-201ENST00000360004 OLFM3Q96PB7 478 aa19.41■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TUBGCP5Q96RT8 1024 aa19.41■□□□□ 0.7
HLA-DRB1-201ENST00000360004 JRKLQ9Y4A0 524 aa19.41■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TBC1D3DA0A087WVF3 549 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TBC1D3IA0A087WXS9 549 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TBC1D3EA0A087X179 549 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TBC1D3KA0A087X1G2 549 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TBC1D3FA6NER0 549 aaPredicted RBP19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 HACD1B0YJ81 288 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TBC1D3LB9A6J9 549 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 NEMP1O14524 444 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 SLC7A4O43246 635 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 MTSS1O43312 755 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 STK10O94804 968 aaKnown RBP19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 PIGNO95427 931 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 IGLV3-19P01714 112 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TBC1D3HP0C7X1 549 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 ITGB7P26010 798 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 ACSL1P33121 698 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 RGRP47804 291 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 METAP1P53582 386 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 EIF3EP60228 445 aaKnown RBP19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 SYCP2LQ5T4T6 812 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 LYSMD4Q5XG99 296 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 PMS2CLQ68D20 193 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TBC1D3GQ6DHY5 549 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 LAIR1Q6GTX8 287 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TBC1D3CQ6IPX1 549 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 DARS2Q6PI48 645 aaKnown RBP19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 CYP2U1Q7Z449 544 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 RGL4Q8IZJ4 473 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 TBC1D3Q8IZP1 549 aaPredicted RBP19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 SLC35F6Q8N357 371 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 ACTL9Q8TC94 416 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 PDCD6IPQ8WUM4 868 aaKnown RBP19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 MAML1Q92585 1016 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 FOXJ1Q92949 421 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 FATE1Q969F0 183 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 HSPA12BQ96MM6 686 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 DUSP15Q9H1R2 295 aaPredicted RBP19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 CARD9Q9H257 536 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 SERGEFQ9UGK8 458 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 AMACRQ9UHK6 382 aa19.4■□□□□ 0.7
HLA-DRB1-201ENST00000360004 USP27XA6NNY8 438 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ENC1O14682 589 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CEP104O60308 925 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 FSBPO95073 299 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PEX11BO96011 259 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CREB5Q02930 508 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 XRCC4Q13426 336 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 NOMO1Q15155 1222 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 DCAF12L1Q5VU92 463 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ADAT2Q7Z6V5 191 aaKnown RBP19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 OR2T34Q8NGX1 318 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 QKIQ96PU8 341 aaKnown RBP eCLIP19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 NUDCD1Q96RS6 583 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 SEMA3CQ99985 751 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 FAM118BQ9BPY3 351 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 MGME1Q9BQP7 344 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 HDAC8Q9BY41 377 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CEP41Q9BYV8 373 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CPEB1Q9BZB8 566 aaKnown RBP19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 SUV39H2Q9H5I1 410 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CACNA1HO95180 2353 aa19.39■□□□□ 0.69
HLA-DRB1-201ENST00000360004 TTC24A2A3L6 582 aaPredicted RBP19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 C16orf96A6NNT2 1141 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 MUSKO15146 869 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PCDH8O95206 1070 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CA4P22748 312 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CES1P23141 567 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 DRD3P35462 400 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ADPRHP54922 357 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 GNG11P61952 73 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 IFI35P80217 286 aaPredicted RBP19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PRKD1Q15139 912 aaPredicted RBP19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 SLC45A4Q5BKX6 768 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 RALGPS1Q5JS13 557 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 WDR45BQ5MNZ6 344 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 NCEH1Q6PIU2 408 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PARS2Q7L3T8 475 aaKnown RBP19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 TTC7BQ86TV6 843 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CAMK1DQ8IU85 385 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 TEX26Q8N6G2 289 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 FAM122AQ96E09 287 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ZC3H10Q96K80 434 aaKnown RBP19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ZNF641Q96N77 438 aaPredicted RBP19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 AGAP3Q96P47 875 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 HERPUD2Q9BSE4 406 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 TLR10Q9BXR5 811 aa19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 KLHL8Q9P2G9 620 aaPredicted RBP19.38■□□□□ 0.69
HLA-DRB1-201ENST00000360004 SHROOM3Q8TF72 1996 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ZNF189O75820 626 aaPredicted RBP19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 HLA-DQB2P05538 268 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 RBP3P10745 1247 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ADRB3P13945 408 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 NFKBIAP25963 317 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CXCR5P32302 372 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms