RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 NFKBIAP25963 317 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 PCSK6P29122 969 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 PTPN9P43378 593 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 NPY2RP49146 381 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SLC5A3P53794 718 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 MGAT5BQ3V5L5 792 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 C6orf10Q5SRN2 563 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 FAM91A1Q658Y4 838 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 NEPROQ6NW34 567 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 PGM2L1Q6PCE3 622 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 LBX2Q6XYB7 198 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 DEFB132Q7Z7B7 95 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 PATL1Q86TB9 770 aaKnown RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF410Q86VK4 478 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 LILRA2Q8N149 483 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 BLOC1S5Q8TDH9 187 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 HEXDCQ8WVB3 486 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 DNAJB3Q8WWF6 145 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 KLRG1Q96E93 195 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 RPL10LQ96L21 214 aaKnown RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 PRICKLE1Q96MT3 831 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 TRIM15Q9C019 465 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 RHOJQ9H4E5 214 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 PKD2L2Q9NZM6 624 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 GMPR2Q9P2T1 348 aaKnown RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SFMBT1Q9UHJ3 866 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 IPO11Q9UI26 975 aaKnown RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 FZD10Q9ULW2 581 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 TRIP11Q15643 1979 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 YJEFN3A6XGL0 299 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ADM5C9JUS6 153 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 G3V2L1 256 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 H3BNX3 289 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 GSTA4O15217 222 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 FAM189A1O60320 539 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ENDOD1O94919 500 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 FASP25445 335 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ENTPD1P49961 510 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ZBTB17Q13105 803 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SNAPC2Q13487 334 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 NFYCQ13952 458 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 TRIM25Q14258 630 aaKnown RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 VPS26BQ4G0F5 336 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SAMD4BQ5PRF9 694 aaKnown RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 C9orf57Q5W0N0 161 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 REP15Q6BDI9 236 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 CUZD1Q86UP6 607 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 RIOX2Q8IUF8 465 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 METTL25Q8N6Q8 603 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 TBL1YQ9BQ87 522 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 MKS1Q9NXB0 559 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 FBXO5Q9UKT4 447 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 PAIP2BQ9ULR5 123 aaKnown RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 TTC24A2A3L6 582 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 E2F6O75461 281 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 BEST1O76090 585 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 CD4P01730 458 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 CPB1P15086 417 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 NCK1P16333 377 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 NPR3P17342 541 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 RXRBP28702 533 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 ADRM1Q16186 407 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 RBBP7Q16576 425 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 KYAT1Q16773 422 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 PFKFB4Q16877 469 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF423Q2M1K9 1284 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 SV2CQ496J9 727 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 BTBD8Q5XKL5 378 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 SLC27A1Q6PCB7 646 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 CNSTQ6PJW8 725 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 ATG14Q6ZNE5 492 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 FASTKD5Q7L8L6 764 aaKnown RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 STRADAQ7RTN6 431 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 PLPPR4Q7Z2D5 763 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 LINC00523Q86TU6 105 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 MARVELD2Q8N4S9 558 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 DDHD1Q8NEL9 900 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 SHCBP1Q8NEM2 672 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 NCLNQ969V3 563 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 ZFP42Q96MM3 310 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 RNF145Q96MT1 663 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 PLEKHG4BQ96PX9 1271 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 MTG1Q9BT17 334 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 CASTOR2A6NHX0 329 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 VILLO15195 856 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 NRP2O60462 931 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 H6PDO95479 791 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 C22orf31O95567 290 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 ALBP02768 609 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 MYL3P08590 195 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 ATP5F1P24539 256 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 TKTP29401 623 aaKnown RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 BFSP2Q13515 415 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 HNRNPDQ14103 355 aaKnown RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 RBM20Q5T481 1227 aaKnown RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 XKR5Q6UX68 686 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 AHI1Q8N157 1196 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 RTP4Q96DX8 246 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 SLC45A3Q96JT2 553 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 SLC29A1Q99808 456 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms