RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 GCNT7Q6ZNI0 430 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 CLNKQ7Z7G1 428 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 GATAD2AQ86YP4 633 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 C10orf107Q8IVU9 208 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 ALG3Q92685 438 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 CCDC3Q9BQI4 270 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 SENP6Q9GZR1 1112 aaPredicted RBP14.98□□□□□ -0.01
CHD4-201ENST00000357008 ERGIC3Q9Y282 383 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 IL12AP29459 219 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 IL17AQ16552 155 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 DENND5AQ6IQ26 1287 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 PMF1Q6P1K2 205 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 MTFMTQ96DP5 389 aaKnown RBP14.98□□□□□ -0.01
CHD4-201ENST00000357008 NARS2Q96I59 477 aaKnown RBP14.98□□□□□ -0.01
CHD4-201ENST00000357008 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.98□□□□□ -0.01
CHD4-201ENST00000357008 COG5Q9UP83 839 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 OR6B1O95007 311 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 BPGMP07738 259 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 QPRTQ15274 297 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 TMEM161BQ8NDZ6 487 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 TRAPPC12Q8WVT3 735 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 VPS35Q96QK1 796 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 OMDQ99983 421 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 WDR12Q9GZL7 423 aaKnown RBP14.98□□□□□ -0.01
CHD4-201ENST00000357008 SPATA31A5Q5VU36 1347 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 SPATA31A7Q8IWB4 1347 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 CYP2A6P11509 494 aaPredicted RBP14.97□□□□□ -0.01
CHD4-201ENST00000357008 MARSP56192 900 aaKnown RBP14.97□□□□□ -0.01
CHD4-201ENST00000357008 HUNKP57058 714 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 BMT2Q1RMZ1 405 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 ULK1O75385 1050 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 CATP04040 527 aaKnown RBP14.97□□□□□ -0.01
CHD4-201ENST00000357008 S100A14Q9HCY8 104 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 XPR1Q9UBH6 696 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 CORO2BQ9UQ03 480 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 UMODL1Q5DID0 1318 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 PPRC1Q5VV67 1664 aaKnown RBP14.97□□□□□ -0.01
CHD4-201ENST00000357008 GTF2E2P29084 291 aaKnown RBP14.97□□□□□ -0.01
CHD4-201ENST00000357008 BNIP1Q12981 228 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 SH3BP5LQ7L8J4 393 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 LRRC49Q8IUZ0 686 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 PCSK9Q8NBP7 692 aaKnown RBP14.97□□□□□ -0.01
CHD4-201ENST00000357008 PPP1R14AQ96A00 147 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 PRDM12Q9H4Q4 367 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 GUCY1B2O75343 617 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 LCA5LO95447 670 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 NTRK1P04629 796 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 CCNB1P14635 433 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 PACS1Q6VY07 963 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 PROSER1Q86XN7 944 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 TNS4Q8IZW8 715 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 CLYBLQ8N0X4 340 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 ADI1Q9BV57 179 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 C8orf4Q9NR00 106 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 SLC17A7Q9P2U7 560 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 LYPLA1O75608 230 aaPredicted RBP14.97□□□□□ -0.01
CHD4-201ENST00000357008 IDO1P14902 403 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 PTPN1P18031 435 aaKnown RBP14.97□□□□□ -0.01
CHD4-201ENST00000357008 TAS2R40P59535 323 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 TGFB2P61812 414 aa14.97□□□□□ -0.01
CHD4-201ENST00000357008 KIAA1210Q9ULL0 1709 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 FAM47E-STBD1D6RA91 191 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 HOXB6P17509 224 aaKnown RBP14.96□□□□□ -0.01
CHD4-201ENST00000357008 CCDC80Q76M96 950 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 MECRQ9BV79 373 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 IDI2Q9BXS1 227 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 TMA7Q9Y2S6 64 aaKnown RBP14.96□□□□□ -0.01
CHD4-201ENST00000357008 SLC28A1O00337 649 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 PIAS1O75925 651 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 BDNFP23560 247 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 CD86P42081 329 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 RPL7AP62424 266 aaKnown RBP14.96□□□□□ -0.01
CHD4-201ENST00000357008 POLR2LP62875 67 aaKnown RBP14.96□□□□□ -0.01
CHD4-201ENST00000357008 SKIV2LQ15477 1246 aaKnown RBP14.96□□□□□ -0.01
CHD4-201ENST00000357008 TXNDC11Q6PKC3 985 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 SAPCD2Q86UD0 394 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 TMEM139Q8IV31 216 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 AZIN1O14977 448 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 SGTAO43765 313 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 TGDSO95455 350 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 FSCN1Q16658 493 aaKnown RBP14.96□□□□□ -0.01
CHD4-201ENST00000357008 ATG14Q6ZNE5 492 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 GPRIN3Q6ZVF9 776 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 PNPOQ9NVS9 261 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 ENTPD4Q9Y227 616 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 PPP2R3BQ9Y5P8 575 aa14.96□□□□□ -0.01
CHD4-201ENST00000357008 TMCC2O75069 709 aa14.96□□□□□ -0.02
CHD4-201ENST00000357008 TTPAP49638 278 aa14.96□□□□□ -0.02
CHD4-201ENST00000357008 PSMD4P55036 377 aaKnown RBP14.96□□□□□ -0.02
CHD4-201ENST00000357008 NBPF12Q5TAG4 269 aaPredicted RBP14.96□□□□□ -0.02
CHD4-201ENST00000357008 ZNF554Q86TJ5 538 aa14.96□□□□□ -0.02
CHD4-201ENST00000357008 LRRC4CQ9HCJ2 640 aa14.96□□□□□ -0.02
CHD4-201ENST00000357008 HAT1O14929 419 aa14.96□□□□□ -0.02
CHD4-201ENST00000357008 SHOX2O60902 331 aaPredicted RBP14.96□□□□□ -0.02
CHD4-201ENST00000357008 NPR3P17342 541 aa14.96□□□□□ -0.02
CHD4-201ENST00000357008 SMIM11AP58511 58 aa14.96□□□□□ -0.02
CHD4-201ENST00000357008 INSCQ1MX18 579 aa14.96□□□□□ -0.02
CHD4-201ENST00000357008 TIMMDC1Q9NPL8 285 aa14.96□□□□□ -0.02
CHD4-201ENST00000357008 DDX4Q9NQI0 724 aaKnown RBP14.96□□□□□ -0.02
CHD4-201ENST00000357008 CMTM6Q9NX76 183 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms