RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 MYO16Q9Y6X6 1858 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 ADAM12O43184 909 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 DCXO43602 365 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 ALDH1A2O94788 518 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 SPATA31D3P0C874 917 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 COL6A1P12109 1028 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 TPH1P17752 444 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 FOLH1Q04609 750 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 BTKQ06187 659 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 CERCAMQ5T4B2 595 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 STXBP5Q5T5C0 1151 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 FBXL19Q6PCT2 694 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 SPATA31D4Q6ZUB0 917 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 DRAXINQ8NBI3 349 aaPredicted RBP21.56■■□□□ 1.04
PTPN18-202ENST00000347849 ICA1LQ8NDH6 482 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 SPATA22Q8NHS9 363 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 NMD3Q96D46 503 aaKnown RBP21.56■■□□□ 1.04
PTPN18-202ENST00000347849 GCNAQ96QF7 691 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 SEPT5Q99719 369 aaPredicted RBP21.56■■□□□ 1.04
PTPN18-202ENST00000347849 MAN1C1Q9NR34 630 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 DCDC2Q9UHG0 476 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 PACSIN3Q9UKS6 424 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 MTMR11A4FU01 709 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 E9PAM4 449 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 PGM3O95394 542 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 EFEMP1Q12805 493 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 PPP2R5DQ14738 602 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 MGAT5BQ3V5L5 792 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 ZNF280DQ6N043 979 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 ISLR2Q6UXK2 745 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 PACS1Q6VY07 963 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 DNAJC28Q9NX36 388 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 TMEM216Q9P0N5 145 aa21.56■■□□□ 1.04
PTPN18-202ENST00000347849 ERVK-10P10266 1014 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 HOXC13P31276 330 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 CHN2P52757 468 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 XIAPP98170 497 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 LRRC23Q53EV4 343 aaPredicted RBP21.55■■□□□ 1.04
PTPN18-202ENST00000347849 SPATA24Q86W54 205 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 MIB1Q86YT6 1006 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 SLC39A13Q96H72 371 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 PAK6Q9NQU5 681 aaPredicted RBP21.55■■□□□ 1.04
PTPN18-202ENST00000347849 VANGL2Q9ULK5 521 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 CAPN8A6NHC0 703 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 PITPNM1O00562 1244 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 ZNF195O14628 629 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 MAFKO60675 156 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 PGAM1P18669 254 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 CYP2C18P33260 490 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 NUMBP49757 651 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 NIPAL4Q0D2K0 466 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 TAF10Q12962 218 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 DUSP4Q13115 394 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 ITGA9Q13797 1035 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 DBN1Q16643 649 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 UGT2A3Q6UWM9 527 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.55■■□□□ 1.04
PTPN18-202ENST00000347849 ACMSDQ8TDX5 336 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 ZNF358Q9NW07 568 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 RPS6KL1Q9Y6S9 549 aa21.55■■□□□ 1.04
PTPN18-202ENST00000347849 H3BNX3 289 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 MT-CYBP00156 380 aaPredicted RBP21.54■■□□□ 1.04
PTPN18-202ENST00000347849 PRKCGP05129 697 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 RALBP11234 206 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 PIM1P11309 404 aaPredicted RBP21.54■■□□□ 1.04
PTPN18-202ENST00000347849 RPL17P18621 184 aaKnown RBP21.54■■□□□ 1.04
PTPN18-202ENST00000347849 ZNF135P52742 658 aaPredicted RBP21.54■■□□□ 1.04
PTPN18-202ENST00000347849 MLLT6P55198 1093 aaPredicted RBP21.54■■□□□ 1.04
PTPN18-202ENST00000347849 ABCE1P61221 599 aaKnown RBP21.54■■□□□ 1.04
PTPN18-202ENST00000347849 USP4Q13107 963 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 PSMD5Q16401 504 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 ANKRD20A4Q4UJ75 823 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 KBTBD6Q86V97 674 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 NPAS4Q8IUM7 802 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 GIPC2Q8TF65 315 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 LAMA3Q16787 3333 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 ATP9BO43861 1147 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 TBC1D4O60343 1298 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 HMBSP08397 361 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 GRK2P25098 689 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 TFAP2DQ7Z6R9 452 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 SDCCAG8Q86SQ7 713 aaPredicted RBP21.54■■□□□ 1.04
PTPN18-202ENST00000347849 DNAAF3Q8N9W5 541 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 CDKL2Q92772 493 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 SERPINB11Q96P15 392 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 BRD8Q9H0E9 1235 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 FBXO44Q9H4M3 255 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 NOL6Q9H6R4 1146 aaKnown RBP21.54■■□□□ 1.04
PTPN18-202ENST00000347849 CASS4Q9NQ75 786 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 IL37Q9NZH6 218 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 COPG2Q9UBF2 871 aa21.54■■□□□ 1.04
PTPN18-202ENST00000347849 CCDC78A2IDD5 438 aa21.53■■□□□ 1.04
PTPN18-202ENST00000347849 COX4I1P13073 169 aa21.53■■□□□ 1.04
PTPN18-202ENST00000347849 MAGEA11P43364 429 aa21.53■■□□□ 1.04
PTPN18-202ENST00000347849 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.53■■□□□ 1.04
PTPN18-202ENST00000347849 FBXO32Q969P5 355 aa21.53■■□□□ 1.04
PTPN18-202ENST00000347849 MFSD3Q96ES6 412 aa21.53■■□□□ 1.04
PTPN18-202ENST00000347849 DTNBP1Q96EV8 351 aa21.53■■□□□ 1.04
PTPN18-202ENST00000347849 HIPK3Q9H422 1215 aa21.53■■□□□ 1.04
PTPN18-202ENST00000347849 TRHDEQ9UKU6 1024 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms