RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ETV4P43268 484 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 GALNT3Q14435 633 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 ZKSCAN8Q15776 578 aaPredicted RBP13.74□□□□□ -0.21
CDC42-202ENST00000344548 DENND6AQ8IWF6 608 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 NSMCE1Q8WV22 266 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 SGSM3Q96HU1 749 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 PSKH2Q96QS6 385 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 MGME1Q9BQP7 344 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 POLR1EQ9GZS1 481 aaKnown RBP13.74□□□□□ -0.21
CDC42-202ENST00000344548 SLCO1B3Q9NPD5 702 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 TREX1Q9NSU2 369 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 UBA2Q9UBT2 640 aaPredicted RBP13.74□□□□□ -0.21
CDC42-202ENST00000344548 TCAF1Q9Y4C2 921 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 EYSQ5T1H1 3165 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 TRAV19A0A0A6YYK7 116 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 MAGEB16A2A368 324 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 BUD23O43709 281 aaKnown RBP13.73□□□□□ -0.21
CDC42-202ENST00000344548 LUC7L3O95232 432 aaKnown RBP13.73□□□□□ -0.21
CDC42-202ENST00000344548 PRAMEF12O95522 483 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 ITGA2BP08514 1039 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 CR2P20023 1033 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 CDC25CP30307 473 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 SCNN1BP51168 640 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 SLC18A1P54219 525 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 SEPT6Q14141 434 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 CGB2Q6NT52 195 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 GRASPQ7Z6J2 395 aaPredicted RBP13.73□□□□□ -0.21
CDC42-202ENST00000344548 STRA8Q7Z7C7 330 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 CMC1Q7Z7K0 106 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 SH3RF2Q8TEC5 729 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 PTPRN2Q92932 1015 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 FAM111AQ96PZ2 611 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 MCMBPQ9BTE3 642 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 SSU72Q9NP77 194 aaKnown RBP13.73□□□□□ -0.21
CDC42-202ENST00000344548 VPS45Q9NRW7 570 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 PCMTD2Q9NV79 361 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 MTO1Q9Y2Z2 717 aaKnown RBP13.73□□□□□ -0.21
CDC42-202ENST00000344548 A0A0U1RQS6 177 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 TPP1O14773 563 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 AURKAO14965 403 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 KRT38O76015 456 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 PDHA1P08559 390 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 EPHA5P54756 1037 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 DNAJC3Q13217 504 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 CTBP1Q13363 440 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 DLG2Q15700 870 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 ALG1LQ6GMV1 187 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 CPLX4Q7Z7G2 160 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 ELMOD1Q8N336 334 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 C12orf76Q8N812 135 aaPredicted RBP13.73□□□□□ -0.21
CDC42-202ENST00000344548 TDRD5Q8NAT2 981 aaKnown RBP13.73□□□□□ -0.21
CDC42-202ENST00000344548 DDI1Q8WTU0 396 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 CDKL2Q92772 493 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 USP13Q92995 863 aaPredicted RBP13.73□□□□□ -0.21
CDC42-202ENST00000344548 APOPT1Q96IL0 206 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 TGS1Q96RS0 853 aaKnown RBP13.73□□□□□ -0.21
CDC42-202ENST00000344548 SRPK1Q96SB4 655 aaKnown RBP13.73□□□□□ -0.21
CDC42-202ENST00000344548 CAB39LQ9H9S4 337 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 GGT7Q9UJ14 662 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 SH3BP1Q9Y3L3 701 aa13.73□□□□□ -0.21
CDC42-202ENST00000344548 ANKRD65E5RJM6 399 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 LATS1O95835 1130 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 PRLP01236 227 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 CCNFP41002 786 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 ARSDP51689 593 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 MYO9BQ13459 2157 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 FSTL4Q6MZW2 842 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 FAM47EQ6ZV65 393 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 CMTM8Q8IZV2 173 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 NDUFAF2Q8N183 169 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 HJURPQ8NCD3 748 aaPredicted RBP13.72□□□□□ -0.21
CDC42-202ENST00000344548 ST13P5Q8NFI4 369 aaPredicted RBP13.72□□□□□ -0.21
CDC42-202ENST00000344548 ING5Q8WYH8 240 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 ZNF707Q96C28 371 aaPredicted RBP13.72□□□□□ -0.21
CDC42-202ENST00000344548 MAGEB18Q96M61 343 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 ZNF599Q96NL3 588 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 TRIB3Q96RU7 358 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 LINC00597Q9H2U6 94 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 CDH22Q9UJ99 828 aa13.72□□□□□ -0.21
CDC42-202ENST00000344548 INTS6Q9UL03 887 aaKnown RBP13.72□□□□□ -0.21
CDC42-202ENST00000344548 FCF1Q9Y324 198 aaKnown RBP13.72□□□□□ -0.21
CDC42-202ENST00000344548 SMAD6O43541 496 aaKnown RBP13.71□□□□□ -0.21
CDC42-202ENST00000344548 DHRS4L1P0CG22 281 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 PTPN2P17706 415 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 CD70P32970 193 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 GP5P40197 560 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 MAGEA10P43363 369 aaPredicted RBP13.71□□□□□ -0.21
CDC42-202ENST00000344548 SERPINH1P50454 418 aaKnown RBP13.71□□□□□ -0.21
CDC42-202ENST00000344548 MPP1Q00013 466 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 UBE3AQ05086 875 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 PDE1CQ14123 709 aaPredicted RBP13.71□□□□□ -0.21
CDC42-202ENST00000344548 CES4AQ5XG92 561 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 TMEM25Q86YD3 366 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 DCLK2Q8N568 766 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 OR13J1Q8NGT2 312 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 RBBP8Q99708 897 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 DDX50Q9BQ39 737 aaKnown RBP13.71□□□□□ -0.21
CDC42-202ENST00000344548 ELAC2Q9BQ52 826 aaKnown RBP13.71□□□□□ -0.21
CDC42-202ENST00000344548 MECRQ9BV79 373 aa13.71□□□□□ -0.21
CDC42-202ENST00000344548 CINPQ9BW66 212 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms