RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 SHROOM3Q8TF72 1996 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 LNP1A1A4G5 178 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 BCLAF3A2AJT9 711 aaKnown RBP18.99■□□□□ 0.63
CDHR4-201ENST00000343366 CFAP69A5D8W1 941 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 TMEM8BA6NDV4 472 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 TTC34A8MYJ7 566 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 CD160O95971 181 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 IGSF6O95976 241 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 TOP3BO95985 862 aaKnown RBP18.99■□□□□ 0.63
CDHR4-201ENST00000343366 FGGP02679 453 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 CCNB1P14635 433 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 PRKCHP24723 683 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 NOVA1P51513 510 aaKnown RBP18.99■□□□□ 0.63
CDHR4-201ENST00000343366 RHOAP61586 193 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 OTUD4Q01804 1114 aaKnown RBP18.99■□□□□ 0.63
CDHR4-201ENST00000343366 ZBTB16Q05516 673 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 ADCY2Q08462 1091 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 AP1B1Q10567 949 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 PRKD1Q15139 912 aaPredicted RBP18.99■□□□□ 0.63
CDHR4-201ENST00000343366 LONRF2Q1L5Z9 754 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 SLC45A4Q5BKX6 768 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 CARD16Q5EG05 197 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 AADACL2Q6P093 401 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 NPNTQ6UXI9 565 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 OR2AP1Q8NGE2 309 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 OR2T3Q8NH03 318 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 OR8D1Q8WZ84 308 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 GDAP1L1Q96MZ0 367 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 CACNA1EQ15878 2313 aa18.99■□□□□ 0.63
CDHR4-201ENST00000343366 A0A1W2PQF6 199 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 H7C0C1 242 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 PGRMC1O00264 195 aaKnown RBP18.98■□□□□ 0.63
CDHR4-201ENST00000343366 STK10O94804 968 aaKnown RBP18.98■□□□□ 0.63
CDHR4-201ENST00000343366 APBB3O95704 486 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 POP4O95707 220 aaKnown RBP18.98■□□□□ 0.63
CDHR4-201ENST00000343366 PRNPP04156 253 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 PECAM1P16284 738 aaPredicted RBP18.98■□□□□ 0.63
CDHR4-201ENST00000343366 CXCR5P32302 372 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 MMP13P45452 471 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 ATP5OP48047 213 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 EIF3EP60228 445 aaKnown RBP18.98■□□□□ 0.63
CDHR4-201ENST00000343366 IFI35P80217 286 aaPredicted RBP18.98■□□□□ 0.63
CDHR4-201ENST00000343366 CCDC15Q0P6D6 951 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 LLGL1Q15334 1064 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 C9orf64Q5T6V5 341 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 FAM46CQ5VWP2 391 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 DRICH1Q6PGQ1 229 aaPredicted RBP18.98■□□□□ 0.63
CDHR4-201ENST00000343366 ARHGAP36Q6ZRI8 547 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 TSTD1Q8NFU3 115 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 QKIQ96PU8 341 aaKnown RBP eCLIP18.98■□□□□ 0.63
CDHR4-201ENST00000343366 LGMNQ99538 433 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 PRSS16Q9NQE7 514 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 EBF1Q9UH73 591 aa18.98■□□□□ 0.63
CDHR4-201ENST00000343366 GCN1Q92616 2671 aaKnown RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 GOLGA6L10A0A0M3HER8 536 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 SRRM3A6NNA2 597 aaPredicted RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 C4orf47A7E2U8 309 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 WASH3PC4AMC7 463 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 C1QTNF3-AMACRE9PGA6 284 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 CDX4O14627 284 aaPredicted RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 SMAD6O43541 496 aaKnown RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 PEX11BO96011 259 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 RBP3P10745 1247 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 HLA-EP13747 358 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 SPINK2P20155 84 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 CSRP1P21291 193 aaKnown RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 STIP1P31948 543 aaKnown RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 WASP42768 502 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 BYSLQ13895 437 aaKnown RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 CCNG2Q16589 344 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 ZNF776Q68DI1 518 aaPredicted RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 ZC3H18Q86VM9 953 aaKnown RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 TP53INP2Q8IXH6 220 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 C17orf53Q8N3J3 647 aaPredicted RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 TMIEQ8NEW7 156 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 TUBGCP5Q96RT8 1024 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 HEPHQ9BQS7 1158 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 OSBPL1AQ9BXW6 950 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 CPEB1Q9BZB8 566 aaKnown RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 POLR1EQ9GZS1 481 aaKnown RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 SAE1Q9UBE0 346 aaPredicted RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 TRHDEQ9UKU6 1024 aa18.97■□□□□ 0.63
CDHR4-201ENST00000343366 FCF1Q9Y324 198 aaKnown RBP18.97■□□□□ 0.63
CDHR4-201ENST00000343366 IGSF10Q6WRI0 2623 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 K7ERQ8 282 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 SIN3BO75182 1162 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 MAP3K6O95382 1288 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 ADH1BP00325 375 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 PI4KAP42356 2102 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 PAFAH1B1P43034 410 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 AP1S1P61966 158 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 SLC10A7Q0GE19 358 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 TUBB2AQ13885 445 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 CYTH1Q15438 398 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 DARS2Q6PI48 645 aaKnown RBP18.96■□□□□ 0.63
CDHR4-201ENST00000343366 TMEM92Q6UXU6 159 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 SYT10Q6XYQ8 523 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 Q6ZVU0 165 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 OR2A12Q8NGT7 310 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 HTR3CQ8WXA8 447 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms