RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 MR1Q95460 341 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 PCDHGB5Q9Y5G0 923 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 MICAL2O94851 1124 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 MSR1P21757 451 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 REPS1Q96D71 796 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 HMG20AQ9NP66 347 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
KPNA4-201ENST00000334256 AMPD1P23109 780 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 RFX4Q33E94 735 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 NKAPLQ5M9Q1 402 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 PRICKLE2Q7Z3G6 844 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 FAM131BQ86XD5 332 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 FAM71DQ8N9W8 422 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 TTC29Q8NA56 475 aaPredicted RBP12.78□□□□□ -0.36
KPNA4-201ENST00000334256 TRIM43Q96BQ3 446 aaPredicted RBP12.78□□□□□ -0.36
KPNA4-201ENST00000334256 CCT8L1PA6NM43 557 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 SSX5O60225 188 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 ELFN1P0C7U0 828 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 CCKBRP32239 447 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 MLLT3P42568 568 aaPredicted RBP12.78□□□□□ -0.36
KPNA4-201ENST00000334256 LHX1P48742 406 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 NAPEPLDQ6IQ20 393 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 PRR5LQ6MZQ0 368 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 GHDCQ8N2G8 530 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 ZSCAN4Q8NAM6 433 aaPredicted RBP12.78□□□□□ -0.36
KPNA4-201ENST00000334256 EPB41L4BQ9H329 900 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 BCAS3Q9H6U6 928 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 GIT1Q9Y2X7 761 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 SGTAO43765 313 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 FCER2P06734 321 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 PRKCHP24723 683 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 GPM6BQ13491 265 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 TEKT5Q96M29 485 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 KCNK16Q96T55 309 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 GNB5O14775 395 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 LGR5O75473 907 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 PCDH1Q08174 1060 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 PPIGQ13427 754 aaKnown RBP eCLIP12.78□□□□□ -0.368e-14■■■□□ 15.5
KPNA4-201ENST00000334256 NCSTNQ92542 709 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 ARL5AQ9Y689 179 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 LRRC9Q6ZRR7 1453 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 CHRNB4P30926 498 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 ELAVL2Q12926 359 aaKnown RBP12.77□□□□□ -0.36
KPNA4-201ENST00000334256 VITQ6UXI7 678 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 HIPK1Q86Z02 1210 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 EAF2Q96CJ1 260 aaPredicted RBP12.77□□□□□ -0.36
KPNA4-201ENST00000334256 CMTM5Q96DZ9 223 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 WASHC1A8K0Z3 465 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 WASH3PC4AMC7 463 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 TPPPO94811 219 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 JCHAINP01591 159 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 MAPK1P28482 360 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 LBX1P52954 281 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 UBE3CQ15386 1083 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 CHADLQ6NUI6 762 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 WASH2PQ6VEQ5 465 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 CYP2R1Q6VVX0 501 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 CLVS1Q8IUQ0 354 aaPredicted RBP12.77□□□□□ -0.36
KPNA4-201ENST00000334256 LPPQ93052 612 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 CCDC120Q96HB5 630 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 BCO2Q9BYV7 579 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 CHIAQ9BZP6 476 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 OSGEPQ9NPF4 335 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 DUS2Q9NX74 493 aaKnown RBP12.77□□□□□ -0.36
KPNA4-201ENST00000334256 FAM58BPP0C7Q3 252 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 SERPINA4P29622 427 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 GDI1P31150 447 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 HPCAL1P37235 193 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 PTPN18Q99952 460 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 NOD2Q9HC29 1040 aa12.77□□□□□ -0.36
KPNA4-201ENST00000334256 PIH1D3Q9NQM4 214 aaKnown RBP12.77□□□□□ -0.36
KPNA4-201ENST00000334256 MRTO4Q9UKD2 239 aaKnown RBP12.77□□□□□ -0.36
KPNA4-201ENST00000334256 CCRL2O00421 344 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 MTSS1O43312 755 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 THEGLP0DJG4 465 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 GEMP55040 296 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 ZNF445P59923 1031 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 SEL1L3Q68CR1 1132 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 BRD7Q9NPI1 651 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 GPATCH2LQ9NWQ4 482 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.77□□□□□ -0.371e-6■■□□□ 12.6
KPNA4-201ENST00000334256 EPHB6O15197 1021 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 SPRP35270 261 aaPredicted RBP12.77□□□□□ -0.37
KPNA4-201ENST00000334256 ALDH3A2P51648 485 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 FAM20AQ96MK3 541 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 PRICKLE1Q96MT3 831 aaPredicted RBP12.77□□□□□ -0.37
KPNA4-201ENST00000334256 RMI1Q9H9A7 625 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 MAGEF1Q9HAY2 307 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 ABCB9Q9NP78 766 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 UBQLN1Q9UMX0 589 aaKnown RBP12.77□□□□□ -0.37
KPNA4-201ENST00000334256 SLC30A6Q6NXT4 461 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 CIR1Q86X95 450 aaPredicted RBP12.77□□□□□ -0.37
KPNA4-201ENST00000334256 ASPNQ9BXN1 380 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 SLAMF7Q9NQ25 335 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 CCDC182A6NF36 153 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 hCG_1984214I3L0E3 225 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 GRK5P34947 590 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 ATP5C1P36542 298 aaKnown RBP12.77□□□□□ -0.37
KPNA4-201ENST00000334256 IFNGR2P38484 337 aa12.77□□□□□ -0.37
KPNA4-201ENST00000334256 GSTM5P46439 218 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms