RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 NR1H3Q13133 447 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 HSF5Q4G112 596 aaPredicted RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 ADGRF1Q5T601 910 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 ITPRIPL1Q6GPH6 555 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 UBE2Q1Q7Z7E8 422 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 TTC7BQ86TV6 843 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 PIM3Q86V86 326 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 FITM2Q8N6M3 262 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 NAT16Q8N8M0 369 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 SORCS1Q8WY21 1168 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CENPTQ96BT3 561 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 PPP1R36Q96LQ0 422 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 MYRFLQ96LU7 910 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 LRRC3BQ96PB8 259 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 OMDQ99983 421 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 TRIM62Q9BVG3 475 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 HERC2P3Q9BVR0 1158 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 LRRC3Q9BY71 257 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 ABCG8Q9H221 673 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 SNX15Q9NRS6 342 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 TK2O00142 265 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CTSAP10619 480 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 PAX3P23760 479 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CA5AP35218 305 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CSKP41240 450 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 SERPINB4P48594 390 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 EPHB3P54753 998 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 SLC18A2Q05940 514 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 SEMA3AQ14563 771 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 TEAD2Q15562 447 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 TCEAL8Q8IYN2 117 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CMTR2Q8IYT2 770 aaKnown RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CACNA2D3Q8IZS8 1091 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 KIF2BQ8N4N8 673 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 ZNF366Q8N895 744 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 MAGEB18Q96M61 343 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 FAM96AQ9H5X1 160 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CRYL1Q9Y2S2 319 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 A0A0G2JND7 137 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 FAM237BA0A1B0GVD1 139 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 LINC01553A4QN01 128 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 H0Y626 953 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PRAMEF11O60813 436 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 KRT37O76014 449 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 MLNP12872 115 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 CD70P32970 193 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PSEN1P49768 467 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 HNRNPDQ14103 355 aaKnown RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 ASTLQ6HA08 431 aaPredicted RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 LILRA6Q6PI73 481 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 SFTPA1Q8IWL2 248 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 RIBC1Q8N443 379 aaPredicted RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 DNAJC1Q96KC8 554 aaKnown RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 TBATAQ96M53 351 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 FERMT1Q9BQL6 677 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 OLA1Q9NTK5 396 aaKnown RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PPARGC1AQ9UBK2 798 aaKnown RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 SOX13Q9UN79 622 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PLLPQ9Y342 182 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 NEMP2A6NFY4 417 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 MYO1CO00159 1063 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 NEFHP12036 1026 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 CTPS1P17812 591 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 TYK2P29597 1187 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 SLC11A2P49281 568 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 HTRA4P83105 476 aaPredicted RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 CDK16Q00536 496 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 IL9RQ01113 521 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 RING1Q06587 406 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 ZNF235Q14590 738 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 VEPH1Q14D04 833 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 CYTH1Q15438 398 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 CHI3L2Q15782 390 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PDK4Q16654 411 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 POM121L1PQ3SYA9 428 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 TRIM68Q6AZZ1 485 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 GPATCH11Q8N954 259 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 OR6P1Q8NGX9 317 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 DDI1Q8WTU0 396 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 HDAC10Q969S8 669 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 LRRC39Q96DD0 335 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 VPS39Q96JC1 886 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 ZFYVE19Q96K21 471 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PHACTR1Q9C0D0 580 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 DNMT3BQ9UBC3 853 aaKnown RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 WASH4PA8MWX3 477 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 SMAPO00193 183 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 UBOX5O94941 541 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PRLP01236 227 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 RHOCP08134 193 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 ALPIP09923 528 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 RENBPP51606 427 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 NDST2P52849 883 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 BST1Q10588 318 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 DLG1Q12959 904 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 SEPT7Q16181 437 aaKnown RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 TPGS2Q68CL5 300 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 NAPEPLDQ6IQ20 393 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PKN3Q6P5Z2 889 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 NAPRTQ6XQN6 538 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms