RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 CALN1Q9BXU9 219 aa8.29□□□□□ -1.08
TPM3-203ENST00000312970 RAB6CQ9H0N0 254 aa8.29□□□□□ -1.08
TPM3-203ENST00000312970 MAGEH1Q9H213 219 aa8.29□□□□□ -1.08
TPM3-203ENST00000312970 FZD3Q9NPG1 666 aa8.29□□□□□ -1.08
TPM3-203ENST00000312970 NLRC4Q9NPP4 1024 aa8.29□□□□□ -1.08
TPM3-203ENST00000312970 FAM207AQ9NSI2 230 aaPredicted RBP8.29□□□□□ -1.08
TPM3-203ENST00000312970 DNAI1Q9UI46 699 aa8.29□□□□□ -1.08
TPM3-203ENST00000312970 FCF1Q9Y324 198 aaKnown RBP8.29□□□□□ -1.08
TPM3-203ENST00000312970 FADS3Q9Y5Q0 445 aa8.29□□□□□ -1.08
TPM3-203ENST00000312970 ARID1BQ8NFD5 2236 aaPredicted RBP8.29□□□□□ -1.08
TPM3-203ENST00000312970 POM121BA6NF01 834 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 C2CD4BA6NLJ0 364 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 C16orf96A6NNT2 1141 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 FAM72CH0Y354 149 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 SCAMP1O15126 338 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 TSPAN6O43657 245 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 PIAS2O75928 621 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 ALPPL2P10696 532 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 UNGP13051 313 aaPredicted RBP8.28□□□□□ -1.08
TPM3-203ENST00000312970 RFC1P35251 1148 aaPredicted RBP8.28□□□□□ -1.08
TPM3-203ENST00000312970 ACVRL1P37023 503 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 NSFP46459 744 aaKnown RBP8.28□□□□□ -1.08
TPM3-203ENST00000312970 KLK7P49862 253 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 ATP1A2P50993 1020 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 JAM2P57087 298 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 HNRNPKP61978 463 aaKnown RBP eCLIP8.28□□□□□ -1.08
TPM3-203ENST00000312970 SNRPD1P62314 119 aaKnown RBP8.28□□□□□ -1.08
TPM3-203ENST00000312970 DAB2P98082 770 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 INSM1Q01101 510 aaPredicted RBP8.28□□□□□ -1.08
TPM3-203ENST00000312970 SEMG2Q02383 582 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 C19orf57Q0VDD7 668 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 POLD3Q15054 466 aaPredicted RBP8.28□□□□□ -1.08
TPM3-203ENST00000312970 MYLK3Q32MK0 819 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 FAM72AQ5TYM5 149 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 MANEALQ5VSG8 457 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 FAM72DQ6L9T8 149 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 GCNT7Q6ZNI0 430 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 SLFN11Q7Z7L1 901 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 ZSCAN30Q86W11 494 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 NLRP14Q86W24 1093 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 FAM72BQ86X60 149 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 RYBPQ8N488 228 aaPredicted RBP8.28□□□□□ -1.08
TPM3-203ENST00000312970 ANKRD20A12PQ8NF67 263 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 JOSD2Q8TAC2 188 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 GPT2Q8TD30 523 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 FAM172AQ8WUF8 416 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 LENG8Q96PV6 779 aaPredicted RBP8.28□□□□□ -1.08
TPM3-203ENST00000312970 C11orf70Q9BRQ4 267 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 SELENOOQ9BVL4 669 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 C1QTNF2Q9BXJ5 285 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 MAGEB5Q9BZ81 275 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 ZDHHC6Q9H6R6 413 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 LMBRD1Q9NUN5 540 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 NDFIP2Q9NV92 336 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 FANCLQ9NW38 375 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 TMEM248Q9NWD8 314 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 UCKL1Q9NWZ5 548 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 DNAJC28Q9NX36 388 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 ADAM22Q9P0K1 906 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 IPO11Q9UI26 975 aaKnown RBP8.28□□□□□ -1.08
TPM3-203ENST00000312970 CLCA2Q9UQC9 943 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 ACTL7AQ9Y615 435 aa8.28□□□□□ -1.08
TPM3-203ENST00000312970 TRPM6Q9BX84 2022 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 TDRD6O60522 2096 aaKnown RBP8.27□□□□□ -1.09
TPM3-203ENST00000312970 SPTY2D1-AS1A0A0U1RR47 76 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 ZSCAN5CA6NGD5 496 aaPredicted RBP8.27□□□□□ -1.09
TPM3-203ENST00000312970 IGLON5A6NGN9 336 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 LRRC10BA6NIK2 292 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 SIGLEC16A6NMB1 481 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 KRIT1O00522 736 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 NEMP1O14524 444 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 FPGTO14772 594 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 EPHB6O15197 1021 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 FFAR2O15552 330 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 RRP8O43159 456 aaKnown RBP8.27□□□□□ -1.09
TPM3-203ENST00000312970 KDELR3O43731 214 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 RAMP2O60895 175 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 LRIG2O94898 1065 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 GJB6O95452 261 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 GSRP00390 522 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 MT-CO3P00414 261 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 CSF2P04141 144 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 CALB1P05937 261 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 GIMD1P0DJR0 217 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 CKMT1AP12532 417 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 EIF2S3P41091 472 aaKnown RBP8.27□□□□□ -1.09
TPM3-203ENST00000312970 RABIFP47224 123 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 DUSP3P51452 185 aaPredicted RBP8.27□□□□□ -1.09
TPM3-203ENST00000312970 HDAC4P56524 1084 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 GSCP56915 257 aaPredicted RBP8.27□□□□□ -1.09
TPM3-203ENST00000312970 RAD51Q06609 339 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 PTP4A2Q12974 167 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 FGL2Q14314 439 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 FZD2Q14332 565 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 SYCP1Q15431 976 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 CLEC16AQ2KHT3 1053 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 ZNF805Q5CZA5 627 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 ZNF542PQ5EBM4 170 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 WDR59Q6PJI9 974 aa8.27□□□□□ -1.09
TPM3-203ENST00000312970 KYAT3Q6YP21 454 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms