RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 PDGFRLQ15198 375 aa22.8■■□□□ 1.24
IRF3-201ENST00000309877 STEAP4Q687X5 459 aa22.8■■□□□ 1.24
IRF3-201ENST00000309877 MRRFQ96E11 262 aaKnown RBP22.8■■□□□ 1.24
IRF3-201ENST00000309877 FEM1CQ96JP0 617 aa22.8■■□□□ 1.24
IRF3-201ENST00000309877 EBF3Q9H4W6 596 aa22.8■■□□□ 1.24
IRF3-201ENST00000309877 PLAC1Q9HBJ0 212 aa22.8■■□□□ 1.24
IRF3-201ENST00000309877 ARNT2Q9HBZ2 717 aa22.8■■□□□ 1.24
IRF3-201ENST00000309877 SLC24A2Q9UI40 661 aa22.8■■□□□ 1.24
IRF3-201ENST00000309877 SLC25A13Q9UJS0 675 aa22.8■■□□□ 1.24
IRF3-201ENST00000309877 RPS6KL1Q9Y6S9 549 aa22.8■■□□□ 1.24
IRF3-201ENST00000309877 LOC285095A0A1B0GVY8 99 aa22.79■■□□□ 1.24
IRF3-201ENST00000309877 K7ERQ8 282 aa22.79■■□□□ 1.24
IRF3-201ENST00000309877 POLR3GO15318 223 aaPredicted RBP22.79■■□□□ 1.24
IRF3-201ENST00000309877 HOXC11O43248 304 aaPredicted RBP22.79■■□□□ 1.24
IRF3-201ENST00000309877 POU3F3P20264 500 aaPredicted RBP22.79■■□□□ 1.24
IRF3-201ENST00000309877 CHRNA4P43681 627 aa22.79■■□□□ 1.24
IRF3-201ENST00000309877 SULT2A1Q06520 285 aa22.79■■□□□ 1.24
IRF3-201ENST00000309877 SLC1A5Q15758 541 aa22.79■■□□□ 1.24
IRF3-201ENST00000309877 PCID2Q5JVF3 399 aa22.79■■□□□ 1.24
IRF3-201ENST00000309877 SPANXN3Q5MJ09 141 aa22.79■■□□□ 1.24
IRF3-201ENST00000309877 YAF2Q8IY57 180 aa22.79■■□□□ 1.24
IRF3-201ENST00000309877 AHI1Q8N157 1196 aa22.79■■□□□ 1.24
IRF3-201ENST00000309877 RIBC1Q8N443 379 aaPredicted RBP22.79■■□□□ 1.24
IRF3-201ENST00000309877 VPS18Q9P253 973 aa22.79■■□□□ 1.24
IRF3-201ENST00000309877 FETUBQ9UGM5 382 aa22.79■■□□□ 1.24
IRF3-201ENST00000309877 NOVA2Q9UNW9 492 aaKnown RBP22.79■■□□□ 1.24
IRF3-201ENST00000309877 SMAD6O43541 496 aaKnown RBP22.78■■□□□ 1.24
IRF3-201ENST00000309877 EPOP01588 193 aa22.78■■□□□ 1.24
IRF3-201ENST00000309877 LTBRP36941 435 aa22.78■■□□□ 1.24
IRF3-201ENST00000309877 POU6F1Q14863 301 aa22.78■■□□□ 1.24
IRF3-201ENST00000309877 CRYMQ14894 314 aa22.78■■□□□ 1.24
IRF3-201ENST00000309877 EFTUD2Q15029 972 aaKnown RBP eCLIP22.78■■□□□ 1.246e-7■■■■□ 23.8
IRF3-201ENST00000309877 VITQ6UXI7 678 aa22.78■■□□□ 1.24
IRF3-201ENST00000309877 MFSD6LQ8IWD5 586 aa22.78■■□□□ 1.24
IRF3-201ENST00000309877 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.78■■□□□ 1.24
IRF3-201ENST00000309877 PPHLN1Q8NEY8 458 aaKnown RBP22.78■■□□□ 1.24
IRF3-201ENST00000309877 MSLNLQ96KJ4 702 aa22.78■■□□□ 1.24
IRF3-201ENST00000309877 RPL10LQ96L21 214 aaKnown RBP22.78■■□□□ 1.24
IRF3-201ENST00000309877 SOX13Q9UN79 622 aa22.78■■□□□ 1.24
IRF3-201ENST00000309877 FAM237BA0A1B0GVD1 139 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 USP1O94782 785 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 LAMP2P13473 410 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 POLR2EP19388 210 aaKnown RBP22.77■■□□□ 1.24
IRF3-201ENST00000309877 HLA-DPA1P20036 260 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 PRKCHP24723 683 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 CTSOP43234 321 aaPredicted RBP22.77■■□□□ 1.24
IRF3-201ENST00000309877 MSH2P43246 934 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 DGKGP49619 791 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 KBTBD12Q3ZCT8 623 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 RALGPS1Q5JS13 557 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 SIRPB2Q5JXA9 342 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 CES3Q6UWW8 571 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 CYS1Q717R9 158 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 TDRPQ86YL5 185 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 SH2D3CQ8N5H7 860 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 ZNF669Q96BR6 464 aaPredicted RBP22.77■■□□□ 1.24
IRF3-201ENST00000309877 FAM83CQ9BQN1 747 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 POMKQ9H5K3 350 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 PPANQ9NQ55 473 aaKnown RBP22.77■■□□□ 1.24
IRF3-201ENST00000309877 CHRAC1Q9NRG0 131 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 CTNNAL1Q9UBT7 734 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 TBK1Q9UHD2 729 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 FBXO10Q9UK96 956 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 IKBKGQ9Y6K9 419 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 PIAS1O75925 651 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 GCAP28676 217 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 ATP5DP30049 168 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 ECT2LQ008S8 904 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 MLLT1Q03111 559 aaPredicted RBP22.77■■□□□ 1.24
IRF3-201ENST00000309877 ANKRD20A4Q4UJ75 823 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 ATXN7L2Q5T6C5 722 aaPredicted RBP22.77■■□□□ 1.24
IRF3-201ENST00000309877 MBLAC2Q68D91 279 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 NCEH1Q6PIU2 408 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 SRLQ86TD4 932 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 TMEM135Q86UB9 458 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 ADIPOR2Q86V24 386 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 CTAGE3PQ8IX95 158 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 PAFAH2Q99487 392 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 KIFC1Q9BW19 673 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 TM6SF2Q9BZW4 377 aa22.77■■□□□ 1.24
IRF3-201ENST00000309877 PSMC3IPQ9P2W1 217 aaPredicted RBP22.77■■□□□ 1.24
IRF3-201ENST00000309877 ARIH1Q9Y4X5 557 aaPredicted RBP22.77■■□□□ 1.24
IRF3-201ENST00000309877 TRIM24O15164 1050 aa22.76■■□□□ 1.23
IRF3-201ENST00000309877 ALDH1A2O94788 518 aa22.76■■□□□ 1.23
IRF3-201ENST00000309877 FGF1P05230 155 aa22.76■■□□□ 1.23
IRF3-201ENST00000309877 ATXN1LP0C7T5 689 aaKnown RBP22.76■■□□□ 1.23
IRF3-201ENST00000309877 CA4P22748 312 aa22.76■■□□□ 1.23
IRF3-201ENST00000309877 STK19P49842 368 aaPredicted RBP22.76■■□□□ 1.23
IRF3-201ENST00000309877 NR1H3Q13133 447 aa22.76■■□□□ 1.23
IRF3-201ENST00000309877 PKN3Q6P5Z2 889 aa22.76■■□□□ 1.23
IRF3-201ENST00000309877 TRMT10BQ6PF06 316 aaKnown RBP22.76■■□□□ 1.23
IRF3-201ENST00000309877 KIAA0907Q7Z7F0 614 aaPredicted RBP22.76■■□□□ 1.23
IRF3-201ENST00000309877 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.76■■□□□ 1.23
IRF3-201ENST00000309877 PTCD2Q8WV60 388 aaKnown RBP22.76■■□□□ 1.23
IRF3-201ENST00000309877 TTC17Q96AE7 1141 aa22.76■■□□□ 1.23
IRF3-201ENST00000309877 ELSPBP1Q96BH3 223 aa22.76■■□□□ 1.23
IRF3-201ENST00000309877 NECTIN4Q96NY8 510 aa22.76■■□□□ 1.23
IRF3-201ENST00000309877 GAS2L1Q99501 681 aaPredicted RBP22.76■■□□□ 1.23
IRF3-201ENST00000309877 ECT2Q9H8V3 914 aa22.76■■□□□ 1.23
IRF3-201ENST00000309877 MOCS1Q9NZB8 636 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms