RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 CDC25CP30307 473 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PSMD8P48556 350 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MED21Q13503 144 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DSC3Q14574 896 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RARS2Q5T160 578 aaKnown RBP10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NEPROQ6NW34 567 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SNX32Q86XE0 403 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CEP70Q8NHQ1 597 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RIN3Q8TB24 985 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MAPK15Q8TD08 544 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ZFAND2BQ8WV99 257 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 KCTD4Q8WVF5 259 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FCRL2Q96LA5 508 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 GBP5Q96PP8 586 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CENPKQ9BS16 269 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FBXO44Q9H4M3 255 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RETREG1Q9H6L5 497 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RBM22Q9NW64 420 aaKnown RBP eCLIP10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MIOSQ9NXC5 875 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CPSF2Q9P2I0 782 aaKnown RBP10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 XPR1Q9UBH6 696 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FBXO5Q9UKT4 447 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TLR6Q9Y2C9 796 aa10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TIMM13Q9Y5L4 95 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MYO16Q9Y6X6 1858 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TNFRSF10BO14763 440 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SLC7A4O43246 635 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DLX3O60479 287 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 B3GAT3O94766 335 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PGK1P00558 417 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CHRNA1P02708 482 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CPB1P15086 417 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RHOQP17081 205 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 GABRB3P28472 473 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SLC1A2P43004 574 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 LEPRP48357 1165 aaKnown RBP10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NUDT2P50583 147 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NAGLUP54802 743 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NAA20P61599 178 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FAM43BQ6ZT52 329 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MON1AQ86VX9 555 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SLC41A1Q8IVJ1 513 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DCP1BQ8IZD4 617 aaKnown RBP10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DSELQ8IZU8 1212 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PQLC1Q8N2U9 271 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 GDPD5Q8WTR4 605 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 LENG1Q96BZ8 264 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ASB2Q96Q27 587 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SLC39A8Q9C0K1 460 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CYP4F11Q9HBI6 524 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SCML2Q9UQR0 700 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DOCK3Q8IZD9 2030 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NUP205Q92621 2012 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 E9PAM4 449 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TMEM189-UBE2V1I3L0A0 370 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PHGDHO43175 533 aaKnown RBP10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SMIM24O75264 130 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PDE5AO76074 875 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 HLA-DQB2P05538 268 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CHRNGP07510 517 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RAG1P15918 1043 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ARNTP27540 789 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TUBP50607 506 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ATP4BP51164 291 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SLC5A3P53794 718 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 INHBCP55103 352 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MLLT6P55198 1093 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PFKPQ01813 784 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 STX5Q13190 355 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 GRM2Q14416 872 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SQLEQ14534 574 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 POU6F1Q14863 301 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NFE2Q16621 373 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PIGGQ5H8A4 983 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 IRAK1BP1Q5VVH5 260 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ZNF470Q6ECI4 717 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 KDELC1Q6UW63 502 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 HPS6Q86YV9 775 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 LSMEM2Q8N112 164 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SLC25A41Q8N5S1 370 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 KDM1BQ8NB78 822 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ICA1LQ8NDH6 482 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ADCY4Q8NFM4 1077 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PYDC1Q8WXC3 89 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 IMP4Q96G21 291 aaKnown RBP10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ELMO2Q96JJ3 720 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MRGPRX2Q96LB1 330 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 C8orf48Q96LL4 319 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 OXCT2Q9BYC2 517 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 EPS15L1Q9UBC2 864 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RIMKLBQ9ULI2 386 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SNX10Q9Y5X0 201 aa10.11□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NYNRINQ9P2P1 1898 aaKnown RBP10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 LOC100653049A0A140TA62 436 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MEIS3P2A8K0S8 358 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 H0YJX3 145 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 H3BNX3 289 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 KRT34O76011 436 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 LTA4HP09960 611 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms