RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 SIX3O95343 332 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 GSRP00390 522 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 POMCP01189 267 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 NOS2P35228 1153 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 ACADSBP45954 432 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 PHEXP78562 749 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 BEX3Q00994 111 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 NIPAL4Q0D2K0 466 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 SLC27A1Q6PCB7 646 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 DNAJC14Q6Y2X3 702 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 KBTBD6Q86V97 674 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 FAM110BQ8TC76 370 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 ING2Q9H160 280 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 FAM50BQ9Y247 325 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 XPOTO43592 962 aaKnown RBP13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 TRMUO75648 421 aaKnown RBP13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 MPOP05164 745 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 HSPA8P11142 646 aaKnown RBP13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 ZNF23P17027 643 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 NPR3P17342 541 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 DPP6P42658 865 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 IREB2P48200 963 aaKnown RBP13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 C4orf22Q6V702 233 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 PLPPR4Q7Z2D5 763 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 FAM35AQ86V20 835 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 MAGEE2Q8TD90 523 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 GPR152Q8TDT2 470 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 SLC29A1Q99808 456 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 C6orf203Q9P0P8 240 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 MTF2Q9Y483 593 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 LRRC14BA6NHZ5 514 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 FZD9O00144 591 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 AP2A1O95782 977 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 SOX4Q06945 474 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 ZNF789Q5FWF6 425 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 OSTM1Q86WC4 334 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 CPNE9Q8IYJ1 553 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 CBR4Q8N4T8 237 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 METTL25Q8N6Q8 603 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 PBXIP1Q96AQ6 731 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 ZNF560Q96MR9 790 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 OXSMQ9NWU1 459 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 KIF13BQ9NQT8 1826 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 IGKV6D-21A0A0A0MT36 114 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 H3BNX3 289 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 MATN2O00339 956 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 MYBPC1Q00872 1141 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 PFKFB4Q16877 469 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 NEPROQ6NW34 567 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 UGT2A3Q6UWM9 527 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 PIM3Q86V86 326 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 DHFR2Q86XF0 187 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 ITFG2Q969R8 447 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 SIKE1Q9BRV8 207 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 HAUS8Q9BT25 410 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 C1orf50Q9BV19 199 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 CROTQ9UKG9 612 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 FBXO5Q9UKT4 447 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 TIMM22Q9Y584 194 aa13.44□□□□□ -0.26
TNFRSF21-201ENST00000296861 MAN1A2O60476 641 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 MTHFD1P11586 935 aaKnown RBP13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 MYL4P12829 197 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 CCR1P32246 355 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 CD151P48509 253 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 ECT2LQ008S8 904 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 STX5Q13190 355 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 ZNF484Q5JVG2 852 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 GPR158Q5T848 1215 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 ANKRD23Q86SG2 305 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 BHMTQ93088 406 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 SPON2Q9BUD6 331 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 CCDC28BQ9BUN5 200 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 MID1IP1Q9NPA3 183 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 SEMA4BQ9NPR2 832 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 LINC00032P0C843 101 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 SETSIPP0DME0 302 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 PROZP22891 400 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 AFF1P51825 1210 aaKnown RBP13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 RAB10P61026 200 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 DCTN2Q13561 401 aaKnown RBP13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 MYBPC3Q14896 1274 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 C6orf10Q5SRN2 563 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 GPRIN1Q7Z2K8 1008 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 GPR141Q7Z602 305 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 RNF168Q8IYW5 571 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 TXNDC5Q8NBS9 432 aaKnown RBP13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 SCAMP5Q8TAC9 235 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 APBB2Q92870 758 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 CYP2S1Q96SQ9 504 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 RRN3Q9NYV6 651 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 RBPJLQ9UBG7 517 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 MYRFQ9Y2G1 1151 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 SLC1A2P43004 574 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 PTPN9P43378 593 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 HARS2P49590 506 aaKnown RBP13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 CYP51A1Q16850 503 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 CATSPER1Q8NEC5 780 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 TRPC4APQ8TEL6 797 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 CDCA5Q96FF9 252 aa13.43□□□□□ -0.26
TNFRSF21-201ENST00000296861 MLPHQ9BV36 600 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms