RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 MMP2P08253 660 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 MAGEA9P43362 315 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 COPAP53621 1224 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 RALGPS1Q5JS13 557 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 TAB3Q8N5C8 712 aaPredicted RBP28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 GRIN3AQ8TCU5 1115 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 FCRL5Q96RD9 977 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 GORASP1Q9BQQ3 440 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 IL36AQ9UHA7 158 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 METTL18O95568 372 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 CD86P42081 329 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 PRPF39Q86UA1 669 aaKnown RBP28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 OR2T3Q8NH03 318 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 SPATA22Q8NHS9 363 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 RBM15Q96T37 977 aaKnown RBP eCLIP28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 IER2Q9BTL4 223 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 RSPH9Q9H1X1 276 aaPredicted RBP28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 PAK5Q9P286 719 aa28.07■■■□□ 2.08
CHCHD4-201ENST00000295767 TTI1O43156 1089 aa28.06■■■□□ 2.08
CHCHD4-201ENST00000295767 PIGNO95427 931 aa28.06■■■□□ 2.08
CHCHD4-201ENST00000295767 CES1P23141 567 aa28.06■■■□□ 2.08
CHCHD4-201ENST00000295767 MAPK8P45983 427 aa28.06■■■□□ 2.08
CHCHD4-201ENST00000295767 MRPS25P82663 173 aaKnown RBP28.06■■■□□ 2.08
CHCHD4-201ENST00000295767 SKOR1P84550 965 aa28.06■■■□□ 2.08
CHCHD4-201ENST00000295767 RAD51Q06609 339 aa28.06■■■□□ 2.08
CHCHD4-201ENST00000295767 DHX34Q14147 1143 aaKnown RBP28.06■■■□□ 2.08
CHCHD4-201ENST00000295767 PPP1R7Q15435 360 aa28.06■■■□□ 2.08
CHCHD4-201ENST00000295767 CPEB1Q9BZB8 566 aaKnown RBP28.06■■■□□ 2.08
CHCHD4-201ENST00000295767 MKRN2Q9H000 416 aaKnown RBP28.06■■■□□ 2.08
CHCHD4-201ENST00000295767 LEFTY1O75610 366 aa28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 MT-CYBP00156 380 aaPredicted RBP28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 VPS41P49754 854 aa28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 PARP6Q2NL67 630 aa28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 ARSIQ5FYB1 569 aa28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 FAXCQ5TGI0 409 aa28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 BMP8AQ7Z5Y6 402 aa28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 JAMLQ86YT9 394 aa28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 MMAAQ8IVH4 418 aaKnown RBP28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 OXNAD1Q96HP4 312 aaPredicted RBP28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 TUBGCP5Q96RT8 1024 aa28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 FBRSQ9HAH7 460 aa28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 UBP1Q9NZI7 540 aa28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 SARDHQ9UL12 918 aa28.05■■■□□ 2.08
CHCHD4-201ENST00000295767 TCRBV21S2A2A0A5A6 115 aa28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 SERPINF2P08697 491 aa28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 DGKEP52429 567 aa28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 PTK6Q13882 451 aa28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 DSG4Q86SJ6 1040 aa28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 CACUL1Q86Y37 369 aa28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 NOA1Q8NC60 698 aaKnown RBP28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 TADA1Q96BN2 335 aa28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 TRIM51Q9BSJ1 452 aa28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 SLC6A17Q9H1V8 727 aa28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 ATP13A3Q9H7F0 1226 aa28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 POLMQ9NP87 494 aaPredicted RBP28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 PPM1HQ9ULR3 514 aa28.04■■■□□ 2.08
CHCHD4-201ENST00000295767 RAD51CO43502 376 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 PRNPP04156 253 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 SATB1Q01826 763 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 GRM3Q14832 879 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 CAMK1DQ8IU85 385 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 MMGT1Q8N4V1 131 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 TMEM105Q8N8V8 129 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 LRRN4CLQ8ND94 238 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 PIP4K2CQ8TBX8 421 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 LRIG1Q96JA1 1093 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 PCDHGC4Q9Y5F7 938 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 IL1BP01584 269 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 UGT2B4P06133 528 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 PSMD8P48556 350 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 BCL2L1Q07817 233 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 ZNF776Q68DI1 518 aaPredicted RBP28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 C4orf22Q6V702 233 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 SYDE1Q6ZW31 735 aaPredicted RBP28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 FBXL6Q8N531 539 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 TMIEQ8NEW7 156 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 HHIPQ96QV1 700 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 MLPHQ9BV36 600 aaPredicted RBP28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 ETNK1Q9HBU6 452 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 RRAGDQ9NQL2 400 aaPredicted RBP28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 RAB6BQ9NRW1 208 aa28.03■■■□□ 2.08
CHCHD4-201ENST00000295767 KMT2EQ8IZD2 1858 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 RNASEH1O60930 286 aaKnown RBP28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 GABRG2P18507 467 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 SERPINA4P29622 427 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 METAP1P53582 386 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 RPS14P62263 151 aaKnown RBP28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 TRAF2Q12933 501 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 GPS1Q13098 491 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 PRPSAP1Q14558 356 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 POM121L1PQ3SYA9 428 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 GDPD4Q6W3E5 623 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 MAATS1Q7Z4T9 603 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 TMPRSS6Q8IU80 811 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 OSBPL1AQ9BXW6 950 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 FAM153AQ9UHL3 310 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 ZDBF2Q9HCK1 2354 aa28.02■■■□□ 2.08
CHCHD4-201ENST00000295767 TRAFD1O14545 582 aaPredicted RBP28.01■■■□□ 2.07
CHCHD4-201ENST00000295767 PMPCBO75439 489 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms