RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PAMP19021 973 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 IRX4P78413 519 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 CREMQ03060 361 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 SEPT6Q14141 434 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 PCLAFQ15004 111 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 UGP2Q16851 508 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 FASTKD1Q53R41 847 aaKnown RBP16.8■□□□□ 0.28
CCDC40-201ENST00000269318 TSTD2Q5T7W7 516 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 MBLAC2Q68D91 279 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 IL31Q6EBC2 164 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 SETD3Q86TU7 594 aaPredicted RBP16.8■□□□□ 0.28
CCDC40-201ENST00000269318 PLD6Q8N2A8 252 aaKnown RBP16.8■□□□□ 0.28
CCDC40-201ENST00000269318 ADAMTS19Q8TE59 1207 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 CYP2S1Q96SQ9 504 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 ACE2Q9BYF1 805 aaPredicted RBP16.8■□□□□ 0.28
CCDC40-201ENST00000269318 ZNF358Q9NW07 568 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 STK39Q9UEW8 545 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 PCDHB12Q9Y5F1 795 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 CCDC195A0A1B0GUA6 201 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 MROH6A6NGR9 719 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 LATS1O95835 1130 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 C2P06681 752 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 CNPP09543 421 aaKnown RBP16.8■□□□□ 0.28
CCDC40-201ENST00000269318 MBL2P11226 248 aaPredicted RBP16.8■□□□□ 0.28
CCDC40-201ENST00000269318 GLDCP23378 1020 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 ALDH3A1P30838 453 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 SLC1A2P43004 574 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 HTRA4P83105 476 aaPredicted RBP16.8■□□□□ 0.28
CCDC40-201ENST00000269318 MPP1Q00013 466 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 CTBP1Q13363 440 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 CXorf57Q6NSI4 855 aaKnown RBP16.8■□□□□ 0.28
CCDC40-201ENST00000269318 NLRP9Q7RTR0 991 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 C2CD4AQ8NCU7 369 aaPredicted RBP16.8■□□□□ 0.28
CCDC40-201ENST00000269318 FEM1CQ96JP0 617 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 PSKH2Q96QS6 385 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 C20orf27Q9GZN8 174 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 MYLK2Q9H1R3 596 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 SMPD4Q9NXE4 827 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 DCTN4Q9UJW0 460 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.79■□□□□ 0.28
CCDC40-201ENST00000269318 E2F8A0AVK6 867 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 TGM5O43548 720 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 TSPAN3O60637 253 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 DCTN3O75935 186 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 EPOP01588 193 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 RHOCP08134 193 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 SPATA31D3P0C874 917 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 FGF3P11487 239 aaPredicted RBP16.79■□□□□ 0.28
CCDC40-201ENST00000269318 OXCT1P55809 520 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 ZXDBP98169 803 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 IRF9Q00978 393 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 ZNF177Q13360 481 aaPredicted RBP16.79■□□□□ 0.28
CCDC40-201ENST00000269318 CCDC153Q494R4 210 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 SPATA31D4Q6ZUB0 917 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 ITIH5Q86UX2 942 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 HERC6Q8IVU3 1022 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 OR13J1Q8NGT2 312 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 LRRC37BQ96QE4 947 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 DDX50Q9BQ39 737 aaKnown RBP16.79■□□□□ 0.28
CCDC40-201ENST00000269318 FAM167BQ9BTA0 163 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 SPON2Q9BUD6 331 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 RASSF4Q9H2L5 321 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 ZNF395Q9H8N7 513 aaPredicted RBP16.79■□□□□ 0.28
CCDC40-201ENST00000269318 UBA2Q9UBT2 640 aaPredicted RBP16.79■□□□□ 0.28
CCDC40-201ENST00000269318 SEPT3Q9UH03 358 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 OBSL1O75147 1896 aa16.79■□□□□ 0.28
CCDC40-201ENST00000269318 GFRA2O00451 464 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 HGSO14964 777 aaPredicted RBP16.78■□□□□ 0.28
CCDC40-201ENST00000269318 C1QTNF8P60827 252 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 NCALDP61601 193 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 SMAD3P84022 425 aaKnown RBP16.78■□□□□ 0.28
CCDC40-201ENST00000269318 CDK18Q07002 472 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 SLC14A2Q15849 920 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 PABPC1LQ4VXU2 614 aaKnown RBP16.78■□□□□ 0.28
CCDC40-201ENST00000269318 MFSD6LQ8IWD5 586 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 ERP27Q96DN0 273 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 TRPC7Q9HCX4 862 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 COPG2Q9UBF2 871 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 SLC39A10Q9ULF5 831 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 CR2P20023 1033 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 HLA-DPA1P20036 260 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 KCNA4P22459 653 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 POLD2P49005 469 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 STX3Q13277 289 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 THOC5Q13769 683 aaKnown RBP16.78■□□□□ 0.28
CCDC40-201ENST00000269318 RFTN1Q14699 578 aaPredicted RBP16.78■□□□□ 0.28
CCDC40-201ENST00000269318 SETDB1Q15047 1291 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 TXNDC8Q6A555 127 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 ZNF470Q6ECI4 717 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 NEPROQ6NW34 567 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 LILRA6Q6PI73 481 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 Q6ZNB5 142 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 ZCCHC23Q6ZST2 131 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 BBS5Q8N3I7 341 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 ARL14EPQ8N8R7 260 aaPredicted RBP16.78■□□□□ 0.28
CCDC40-201ENST00000269318 CLP1Q92989 425 aaKnown RBP16.78■□□□□ 0.28
CCDC40-201ENST00000269318 NSMCE3Q96MG7 304 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 TRIB3Q96RU7 358 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 C1QTNF1Q9BXJ1 281 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 LRRC3Q9BY71 257 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms